Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRGAP2CP0DJJ0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 AC009053.2-201ENST00000563701 2365 ntBASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 SPCS2P1-201ENST00000561636 679 ntBASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 PCDHA12-202ENST00000613593 2588 ntBASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SRGAP2CP0DJJ0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 AGGF1P2-201ENST00000426656 2106 ntBASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 AC097493.3-201ENST00000509725 367 ntBASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 LINC01144-201ENST00000626198 1710 ntBASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SRGAP2CP0DJJ0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 AL353705.2-201ENST00000428243 662 ntBASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 BCRP1-201ENST00000444246 691 ntBASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 AL096865.1-201ENST00000606796 927 ntBASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 AC007967.4-201ENST00000614700 386 ntBASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 AL390754.1-201ENST00000619088 582 ntBASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRGAP2CP0DJJ0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRGAP2CP0DJJ0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRGAP2CP0DJJ0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRGAP2CP0DJJ0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SRGAP2CP0DJJ0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms