Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.86□□□□□ -0.19
CD74P04233 AC079776.2-201ENST00000641154 1609 ntBASIC13.86□□□□□ -0.19
CD74P04233 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD74P04233 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.86□□□□□ -0.19
CD74P04233 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.85□□□□□ -0.19
CD74P04233 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.85□□□□□ -0.19
CD74P04233 AC138035.3-201ENST00000622706 2791 ntBASIC13.85□□□□□ -0.19
CD74P04233 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CD74P04233 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CD74P04233 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.85□□□□□ -0.19
CD74P04233 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.85□□□□□ -0.19
CD74P04233 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CD74P04233 CYP2A7P1-201ENST00000595391 815 ntBASIC13.85□□□□□ -0.19
CD74P04233 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD74P04233 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CD74P04233 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.85□□□□□ -0.19
CD74P04233 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.85□□□□□ -0.19
CD74P04233 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD74P04233 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD74P04233 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CD74P04233 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.84□□□□□ -0.19
CD74P04233 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CD74P04233 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.84□□□□□ -0.19
CD74P04233 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CD74P04233 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.84□□□□□ -0.19
CD74P04233 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.84□□□□□ -0.19
CD74P04233 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.84□□□□□ -0.19
CD74P04233 RCN1P2-201ENST00000398357 915 ntBASIC13.84□□□□□ -0.19
CD74P04233 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 AC092647.4-201ENST00000457211 535 ntBASIC13.84□□□□□ -0.19
CD74P04233 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.84□□□□□ -0.19
CD74P04233 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CD74P04233 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.84□□□□□ -0.19
CD74P04233 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.84□□□□□ -0.19
CD74P04233 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.84□□□□□ -0.19
CD74P04233 BNIP3P18-201ENST00000593976 575 ntBASIC13.84□□□□□ -0.19
CD74P04233 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.84□□□□□ -0.19
CD74P04233 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
CD74P04233 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.84□□□□□ -0.19
CD74P04233 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CD74P04233 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.84□□□□□ -0.19
CD74P04233 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 CICP24-201ENST00000605464 2705 ntBASIC13.84□□□□□ -0.19
CD74P04233 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CD74P04233 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD74P04233 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CD74P04233 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CD74P04233 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.83□□□□□ -0.19
CD74P04233 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms