Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.22□□□□□ -0.29
APOC3P02656 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.22□□□□□ -0.29
APOC3P02656 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
APOC3P02656 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 AL928921.2-201ENST00000641325 2442 ntBASIC13.22□□□□□ -0.29
APOC3P02656 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 AC069224.1-201ENST00000566372 1715 ntBASIC13.22□□□□□ -0.29
APOC3P02656 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.22□□□□□ -0.29
APOC3P02656 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.22□□□□□ -0.29
APOC3P02656 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 MIR939-201ENST00000401314 82 ntBASIC13.22□□□□□ -0.29
APOC3P02656 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 AL355355.2-201ENST00000442321 338 ntBASIC13.22□□□□□ -0.29
APOC3P02656 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 AF213884.3-201ENST00000563833 479 ntBASIC13.22□□□□□ -0.29
APOC3P02656 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
APOC3P02656 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
APOC3P02656 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
APOC3P02656 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOC3P02656 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.22□□□□□ -0.29
APOC3P02656 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC3P02656 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
APOC3P02656 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
APOC3P02656 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC3P02656 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC3P02656 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
APOC3P02656 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC3P02656 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
APOC3P02656 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC3P02656 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC3P02656 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.21□□□□□ -0.29
APOC3P02656 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.21□□□□□ -0.29
APOC3P02656 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
APOC3P02656 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.21□□□□□ -0.29
APOC3P02656 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.21□□□□□ -0.29
APOC3P02656 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.21□□□□□ -0.29
APOC3P02656 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
APOC3P02656 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
APOC3P02656 AJ011931.1-201ENST00000618749 2492 ntBASIC13.21□□□□□ -0.29
APOC3P02656 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.21□□□□□ -0.3
APOC3P02656 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC3P02656 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
APOC3P02656 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
APOC3P02656 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC3P02656 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.21□□□□□ -0.3
APOC3P02656 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
APOC3P02656 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
APOC3P02656 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms