Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-AP01891 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-AP01891 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-AP01891 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 AC003669.1-201ENST00000334569 611 ntBASIC13.96□□□□□ -0.17
HLA-AP01891 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-AP01891 MIR1224-201ENST00000408193 85 ntBASIC13.96□□□□□ -0.17
HLA-AP01891 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.96□□□□□ -0.17
HLA-AP01891 AC010331.1-201ENST00000611423 582 ntBASIC13.96□□□□□ -0.17
HLA-AP01891 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.96□□□□□ -0.17
HLA-AP01891 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HLA-AP01891 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-AP01891 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-AP01891 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-AP01891 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-AP01891 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HLA-AP01891 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.96□□□□□ -0.18
HLA-AP01891 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-AP01891 MYO15B-237ENST00000642007 4893 ntBASIC13.96□□□□□ -0.18
HLA-AP01891 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-AP01891 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HLA-AP01891 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HLA-AP01891 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 AC006277.1-201ENST00000624348 1610 ntBASIC13.95□□□□□ -0.18
HLA-AP01891 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 MIR662-201ENST00000384847 95 ntBASIC13.95□□□□□ -0.18
HLA-AP01891 AL031133.1-201ENST00000406807 723 ntBASIC13.95□□□□□ -0.18
HLA-AP01891 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-AP01891 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-AP01891 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-AP01891 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.95□□□□□ -0.18
HLA-AP01891 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HLA-AP01891 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.95□□□□□ -0.18
HLA-AP01891 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.95□□□□□ -0.18
HLA-AP01891 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HLA-AP01891 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HLA-AP01891 AC112504.1-201ENST00000623415 1841 ntBASIC13.94□□□□□ -0.18
HLA-AP01891 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HLA-AP01891 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-AP01891 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.94□□□□□ -0.18
HLA-AP01891 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-AP01891 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-AP01891 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-AP01891 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HLA-AP01891 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-AP01891 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-AP01891 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-AP01891 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-AP01891 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HLA-AP01891 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HLA-AP01891 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-AP01891 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.94□□□□□ -0.18
HLA-AP01891 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.94□□□□□ -0.18
HLA-AP01891 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HLA-AP01891 FAM220CP-201ENST00000395253 831 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms