Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
IFNA1P01562 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
IFNA1P01562 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 SSR4P1-203ENST00000599569 2260 ntBASIC13.07□□□□□ -0.32
IFNA1P01562 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.07□□□□□ -0.32
IFNA1P01562 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.07□□□□□ -0.32
IFNA1P01562 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.07□□□□□ -0.32
IFNA1P01562 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
IFNA1P01562 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
IFNA1P01562 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
IFNA1P01562 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
IFNA1P01562 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
IFNA1P01562 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.06□□□□□ -0.32
IFNA1P01562 AC034232.1-201ENST00000506026 1064 ntBASIC13.06□□□□□ -0.32
IFNA1P01562 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
IFNA1P01562 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
IFNA1P01562 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 AL109954.1-202ENST00000564051 2148 ntBASIC13.06□□□□□ -0.32
IFNA1P01562 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
IFNA1P01562 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
IFNA1P01562 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
IFNA1P01562 LINC01101-201ENST00000622953 1884 ntBASIC13.06□□□□□ -0.32
IFNA1P01562 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
IFNA1P01562 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
IFNA1P01562 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.06□□□□□ -0.32
IFNA1P01562 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.05□□□□□ -0.32
IFNA1P01562 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.05□□□□□ -0.32
IFNA1P01562 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
IFNA1P01562 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
IFNA1P01562 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.05□□□□□ -0.32
IFNA1P01562 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
IFNA1P01562 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.05□□□□□ -0.32
IFNA1P01562 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.05□□□□□ -0.32
IFNA1P01562 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.05□□□□□ -0.32
IFNA1P01562 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
IFNA1P01562 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
IFNA1P01562 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms