Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 PCDHA1-201ENST00000378133 2726 ntBASIC17.23■□□□□ 0.35
OPHN1O60890 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
OPHN1O60890 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OPHN1O60890 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
OPHN1O60890 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.22■□□□□ 0.35
OPHN1O60890 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
OPHN1O60890 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.22■□□□□ 0.35
OPHN1O60890 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.22■□□□□ 0.35
OPHN1O60890 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 SPCS2P1-201ENST00000561636 679 ntBASIC17.22■□□□□ 0.35
OPHN1O60890 PDPK2P-202ENST00000562415 1191 ntBASIC17.22■□□□□ 0.35
OPHN1O60890 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.22■□□□□ 0.35
OPHN1O60890 AC239800.4-201ENST00000603712 296 ntBASIC17.22■□□□□ 0.35
OPHN1O60890 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.22■□□□□ 0.35
OPHN1O60890 AC010654.1-201ENST00000615722 808 ntBASIC17.22■□□□□ 0.35
OPHN1O60890 REXO1L3P-201ENST00000622202 1288 ntBASIC17.22■□□□□ 0.35
OPHN1O60890 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.22■□□□□ 0.35
OPHN1O60890 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.22■□□□□ 0.35
OPHN1O60890 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.22■□□□□ 0.35
OPHN1O60890 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.22■□□□□ 0.35
OPHN1O60890 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OPHN1O60890 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
OPHN1O60890 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.21■□□□□ 0.35
OPHN1O60890 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
OPHN1O60890 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
OPHN1O60890 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 AC244107.1-201ENST00000442033 332 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 ACTG1P14-201ENST00000446382 1122 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.21■□□□□ 0.35
OPHN1O60890 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.21■□□□□ 0.35
OPHN1O60890 AP000344.2-201ENST00000512987 629 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.21■□□□□ 0.35
OPHN1O60890 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.21■□□□□ 0.35
OPHN1O60890 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 AC004449.1-201ENST00000564240 433 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 AL031432.2-201ENST00000566714 459 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 AL928711.1-201ENST00000570165 459 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 AC091167.2-201ENST00000579581 588 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 MPDU1-223ENST00000582151 728 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 AC027612.4-201ENST00000605371 583 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 AC093028.1-201ENST00000622998 982 ntBASIC17.21■□□□□ 0.35
OPHN1O60890 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.21■□□□□ 0.35
OPHN1O60890 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
OPHN1O60890 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
OPHN1O60890 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.21■□□□□ 0.35
OPHN1O60890 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OPHN1O60890 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms