Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.8□□□□□ -0.36
PDE6DO43924 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.8□□□□□ -0.36
PDE6DO43924 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.8□□□□□ -0.36
PDE6DO43924 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.8□□□□□ -0.36
PDE6DO43924 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
PDE6DO43924 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
PDE6DO43924 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 AC023908.3-201ENST00000564211 3047 ntBASIC12.8□□□□□ -0.36
PDE6DO43924 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.8□□□□□ -0.36
PDE6DO43924 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.8□□□□□ -0.36
PDE6DO43924 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.8□□□□□ -0.36
PDE6DO43924 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PDE6DO43924 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 AC125634.1-201ENST00000438758 1403 ntBASIC12.79□□□□□ -0.36
PDE6DO43924 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PDE6DO43924 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 CICP24-201ENST00000605464 2705 ntBASIC12.79□□□□□ -0.36
PDE6DO43924 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.79□□□□□ -0.36
PDE6DO43924 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 AL390955.1-201ENST00000428694 934 ntBASIC12.79□□□□□ -0.36
PDE6DO43924 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.79□□□□□ -0.36
PDE6DO43924 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.79□□□□□ -0.36
PDE6DO43924 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PDE6DO43924 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 SNX18-202ENST00000343017 3140 ntBASIC12.79□□□□□ -0.36
PDE6DO43924 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PDE6DO43924 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PDE6DO43924 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 AC087481.3-201ENST00000602886 1894 ntBASIC12.78□□□□□ -0.36
PDE6DO43924 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.78□□□□□ -0.36
PDE6DO43924 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
PDE6DO43924 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.78□□□□□ -0.36
PDE6DO43924 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PDE6DO43924 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.78□□□□□ -0.36
PDE6DO43924 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC12.78□□□□□ -0.36
PDE6DO43924 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.78□□□□□ -0.36
PDE6DO43924 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.78□□□□□ -0.36
PDE6DO43924 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PDE6DO43924 HNRNPRP1-201ENST00000453465 1695 ntBASIC12.78□□□□□ -0.36
PDE6DO43924 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 MIR1238-201ENST00000408483 83 ntBASIC12.78□□□□□ -0.36
PDE6DO43924 ECEL1P3-201ENST00000427961 737 ntBASIC12.78□□□□□ -0.36
PDE6DO43924 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.78□□□□□ -0.36
PDE6DO43924 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.78□□□□□ -0.36
PDE6DO43924 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
PDE6DO43924 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PDE6DO43924 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PDE6DO43924 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms