Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.69■□□□□ 0.1
DUX1O43812 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.69■□□□□ 0.1
DUX1O43812 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.69■□□□□ 0.1
DUX1O43812 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 PIN1P1-201ENST00000412108 996 ntBASIC15.69■□□□□ 0.1
DUX1O43812 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.69■□□□□ 0.1
DUX1O43812 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 RN7SL618P-201ENST00000477850 296 ntBASIC15.69■□□□□ 0.1
DUX1O43812 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.69■□□□□ 0.1
DUX1O43812 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.69■□□□□ 0.1
DUX1O43812 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.69■□□□□ 0.1
DUX1O43812 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.69■□□□□ 0.1
DUX1O43812 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.69■□□□□ 0.1
DUX1O43812 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 U82695.1-201ENST00000635752 1889 ntBASIC15.69■□□□□ 0.1
DUX1O43812 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
DUX1O43812 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.69■□□□□ 0.1
DUX1O43812 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
DUX1O43812 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DUX1O43812 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.68■□□□□ 0.1
DUX1O43812 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
DUX1O43812 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.68■□□□□ 0.1
DUX1O43812 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.68■□□□□ 0.1
DUX1O43812 GGT3P-204ENST00000453783 1664 ntBASIC15.68■□□□□ 0.1
DUX1O43812 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
DUX1O43812 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.68■□□□□ 0.1
DUX1O43812 CRB3P1-201ENST00000449338 276 ntBASIC15.68■□□□□ 0.1
DUX1O43812 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 AP005018.1-201ENST00000525475 301 ntBASIC15.68■□□□□ 0.1
DUX1O43812 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.68■□□□□ 0.1
DUX1O43812 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.68■□□□□ 0.1
DUX1O43812 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.68■□□□□ 0.1
DUX1O43812 AL844908.2-201ENST00000609461 460 ntBASIC15.68■□□□□ 0.1
DUX1O43812 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.68■□□□□ 0.1
DUX1O43812 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
DUX1O43812 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
DUX1O43812 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
DUX1O43812 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.68■□□□□ 0.1
DUX1O43812 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX1O43812 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
DUX1O43812 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.67■□□□□ 0.1
DUX1O43812 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX1O43812 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX1O43812 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.67■□□□□ 0.1
DUX1O43812 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.67■□□□□ 0.1
DUX1O43812 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.67■□□□□ 0.1
DUX1O43812 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX1O43812 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX1O43812 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
DUX1O43812 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
DUX1O43812 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
DUX1O43812 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
DUX1O43812 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.67■□□□□ 0.1
DUX1O43812 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms