Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.96■□□□□ 0.95
CHL1O00533 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.96■□□□□ 0.95
CHL1O00533 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 CYP4F24P-201ENST00000586049 1580 ntBASIC20.96■□□□□ 0.95
CHL1O00533 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CHL1O00533 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CHL1O00533 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CHL1O00533 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CHL1O00533 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 AC006449.6-201ENST00000612330 2296 ntBASIC20.95■□□□□ 0.95
CHL1O00533 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHL1O00533 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
CHL1O00533 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.95■□□□□ 0.94
CHL1O00533 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.95■□□□□ 0.94
CHL1O00533 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.95■□□□□ 0.94
CHL1O00533 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CHL1O00533 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CHL1O00533 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.95■□□□□ 0.94
CHL1O00533 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC20.95■□□□□ 0.94
CHL1O00533 HIST3H2BA-201ENST00000436555 524 ntBASIC20.95■□□□□ 0.94
CHL1O00533 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.95■□□□□ 0.94
CHL1O00533 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.95■□□□□ 0.94
CHL1O00533 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.95■□□□□ 0.94
CHL1O00533 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.95■□□□□ 0.94
CHL1O00533 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.95■□□□□ 0.94
CHL1O00533 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHL1O00533 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.95■□□□□ 0.94
CHL1O00533 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CHL1O00533 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.95■□□□□ 0.94
CHL1O00533 AC092364.2-201ENST00000596710 2692 ntBASIC20.95■□□□□ 0.94
CHL1O00533 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHL1O00533 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.95■□□□□ 0.94
CHL1O00533 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHL1O00533 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.94■□□□□ 0.94
CHL1O00533 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.94■□□□□ 0.94
CHL1O00533 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHL1O00533 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.94■□□□□ 0.94
CHL1O00533 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.94■□□□□ 0.94
CHL1O00533 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHL1O00533 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CHL1O00533 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.94■□□□□ 0.94
CHL1O00533 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CHL1O00533 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.94■□□□□ 0.94
CHL1O00533 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.94■□□□□ 0.94
CHL1O00533 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.94■□□□□ 0.94
CHL1O00533 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.94■□□□□ 0.94
CHL1O00533 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC20.94■□□□□ 0.94
CHL1O00533 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHL1O00533 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CHL1O00533 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHL1O00533 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHL1O00533 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CHL1O00533 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.94■□□□□ 0.94
CHL1O00533 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHL1O00533 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CHL1O00533 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CHL1O00533 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.93■□□□□ 0.94
CHL1O00533 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHL1O00533 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms