Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AC041040.2-201ENST00000622926 2899 ntBASIC11.6□□□□□ -0.55
LINC01546A6NGU7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 MMP23A-201ENST00000234610 1017 ntBASIC11.6□□□□□ -0.55
LINC01546A6NGU7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AC142381.4-202ENST00000563973 229 ntBASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AL592071.1-201ENST00000611956 408 ntBASIC11.6□□□□□ -0.55
LINC01546A6NGU7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
LINC01546A6NGU7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 BEND3P1-201ENST00000421591 1944 ntBASIC11.59□□□□□ -0.55
LINC01546A6NGU7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 COPE-203ENST00000351079 907 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 PAWRP1-201ENST00000451083 565 ntBASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.59□□□□□ -0.55
LINC01546A6NGU7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms