Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PTCH2Q9Y6C5 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PTCH2Q9Y6C5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PTCH2Q9Y6C5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
PTCH2Q9Y6C5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.96
PTCH2Q9Y6C5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCH2Q9Y6C5 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.26■■□□□ 1.95
PTCH2Q9Y6C5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.26■■□□□ 1.95
PTCH2Q9Y6C5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PTCH2Q9Y6C5 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PTCH2Q9Y6C5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCH2Q9Y6C5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCH2Q9Y6C5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCH2Q9Y6C5 UNC93B3-201ENST00000308076 687 ntBASIC27.25■■□□□ 1.95
PTCH2Q9Y6C5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.25■■□□□ 1.95
PTCH2Q9Y6C5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCH2Q9Y6C5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.25■■□□□ 1.95
PTCH2Q9Y6C5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.25■■□□□ 1.95
PTCH2Q9Y6C5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCH2Q9Y6C5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.25■■□□□ 1.95
PTCH2Q9Y6C5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
PTCH2Q9Y6C5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC27.24■■□□□ 1.95
PTCH2Q9Y6C5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PTCH2Q9Y6C5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC27.24■■□□□ 1.95
PTCH2Q9Y6C5 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.24■■□□□ 1.95
PTCH2Q9Y6C5 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PTCH2Q9Y6C5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
PTCH2Q9Y6C5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.23■■□□□ 1.95
PTCH2Q9Y6C5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.23■■□□□ 1.95
PTCH2Q9Y6C5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCH2Q9Y6C5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCH2Q9Y6C5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCH2Q9Y6C5 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PTCH2Q9Y6C5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
PTCH2Q9Y6C5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC27.22■■□□□ 1.95
PTCH2Q9Y6C5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
PTCH2Q9Y6C5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.21■■□□□ 1.95
PTCH2Q9Y6C5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
PTCH2Q9Y6C5 AL136162.1-201ENST00000607711 1078 ntBASIC27.21■■□□□ 1.95
PTCH2Q9Y6C5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.21■■□□□ 1.95
PTCH2Q9Y6C5 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.21■■□□□ 1.95
PTCH2Q9Y6C5 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.21■■□□□ 1.95
PTCH2Q9Y6C5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
PTCH2Q9Y6C5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PTCH2Q9Y6C5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
PTCH2Q9Y6C5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PTCH2Q9Y6C5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC27.2■■□□□ 1.94
PTCH2Q9Y6C5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
PTCH2Q9Y6C5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PTCH2Q9Y6C5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PTCH2Q9Y6C5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC27.19■■□□□ 1.94
PTCH2Q9Y6C5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.19■■□□□ 1.94
PTCH2Q9Y6C5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PTCH2Q9Y6C5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PTCH2Q9Y6C5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.18■■□□□ 1.94
PTCH2Q9Y6C5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PTCH2Q9Y6C5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
PTCH2Q9Y6C5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
PTCH2Q9Y6C5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC27.17■■□□□ 1.94
PTCH2Q9Y6C5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PTCH2Q9Y6C5 AC105265.2-201ENST00000467189 838 ntBASIC27.16■■□□□ 1.94
PTCH2Q9Y6C5 AC011551.1-201ENST00000614101 683 ntBASIC27.16■■□□□ 1.94
PTCH2Q9Y6C5 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PTCH2Q9Y6C5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
PTCH2Q9Y6C5 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
PTCH2Q9Y6C5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
PTCH2Q9Y6C5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PTCH2Q9Y6C5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.15■■□□□ 1.94
PTCH2Q9Y6C5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PTCH2Q9Y6C5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PTCH2Q9Y6C5 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PTCH2Q9Y6C5 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PTCH2Q9Y6C5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
PTCH2Q9Y6C5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.13■■□□□ 1.93
PTCH2Q9Y6C5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC27.13■■□□□ 1.93
PTCH2Q9Y6C5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.13■■□□□ 1.93
PTCH2Q9Y6C5 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PTCH2Q9Y6C5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PTCH2Q9Y6C5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
PTCH2Q9Y6C5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 EDA-201ENST00000338901 1233 ntBASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 AL355001.2-201ENST00000620617 1191 ntBASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
PTCH2Q9Y6C5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
PTCH2Q9Y6C5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.11■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms