Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HS3ST3A1Q9Y663 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.51■■□□□ 1.35
HS3ST3A1Q9Y663 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HS3ST3A1Q9Y663 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
HS3ST3A1Q9Y663 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.51■■□□□ 1.35
HS3ST3A1Q9Y663 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
HS3ST3A1Q9Y663 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HS3ST3A1Q9Y663 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
HS3ST3A1Q9Y663 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HS3ST3A1Q9Y663 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HS3ST3A1Q9Y663 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.5■■□□□ 1.35
HS3ST3A1Q9Y663 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.5■■□□□ 1.35
HS3ST3A1Q9Y663 AC011551.1-201ENST00000614101 683 ntBASIC23.5■■□□□ 1.35
HS3ST3A1Q9Y663 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HS3ST3A1Q9Y663 AC021242.3-201ENST00000607598 1377 ntBASIC23.5■■□□□ 1.35
HS3ST3A1Q9Y663 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HS3ST3A1Q9Y663 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
HS3ST3A1Q9Y663 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HS3ST3A1Q9Y663 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.49■■□□□ 1.35
HS3ST3A1Q9Y663 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HS3ST3A1Q9Y663 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HS3ST3A1Q9Y663 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
HS3ST3A1Q9Y663 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.48■■□□□ 1.35
HS3ST3A1Q9Y663 MIR4281-201ENST00000580852 62 ntBASIC23.48■■□□□ 1.35
HS3ST3A1Q9Y663 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
HS3ST3A1Q9Y663 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HS3ST3A1Q9Y663 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.48■■□□□ 1.35
HS3ST3A1Q9Y663 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
HS3ST3A1Q9Y663 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.47■■□□□ 1.35
HS3ST3A1Q9Y663 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.47■■□□□ 1.35
HS3ST3A1Q9Y663 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HS3ST3A1Q9Y663 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.47■■□□□ 1.35
HS3ST3A1Q9Y663 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
HS3ST3A1Q9Y663 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.47■■□□□ 1.35
HS3ST3A1Q9Y663 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HS3ST3A1Q9Y663 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HS3ST3A1Q9Y663 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
HS3ST3A1Q9Y663 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.46■■□□□ 1.35
HS3ST3A1Q9Y663 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.46■■□□□ 1.35
HS3ST3A1Q9Y663 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
HS3ST3A1Q9Y663 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
HS3ST3A1Q9Y663 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.46■■□□□ 1.35
HS3ST3A1Q9Y663 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
HS3ST3A1Q9Y663 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
HS3ST3A1Q9Y663 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
HS3ST3A1Q9Y663 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
HS3ST3A1Q9Y663 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.45■■□□□ 1.34
HS3ST3A1Q9Y663 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.44■■□□□ 1.34
HS3ST3A1Q9Y663 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.44■■□□□ 1.34
HS3ST3A1Q9Y663 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.44■■□□□ 1.34
HS3ST3A1Q9Y663 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.44■■□□□ 1.34
HS3ST3A1Q9Y663 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HS3ST3A1Q9Y663 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.44■■□□□ 1.34
HS3ST3A1Q9Y663 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 UNC93B8-201ENST00000511903 705 ntBASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.43■■□□□ 1.34
HS3ST3A1Q9Y663 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HS3ST3A1Q9Y663 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HS3ST3A1Q9Y663 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.42■■□□□ 1.34
HS3ST3A1Q9Y663 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
HS3ST3A1Q9Y663 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HS3ST3A1Q9Y663 AC092028.1-203ENST00000608262 953 ntBASIC23.42■■□□□ 1.34
HS3ST3A1Q9Y663 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.42■■□□□ 1.34
HS3ST3A1Q9Y663 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HS3ST3A1Q9Y663 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HS3ST3A1Q9Y663 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
HS3ST3A1Q9Y663 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HS3ST3A1Q9Y663 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.41■■□□□ 1.34
HS3ST3A1Q9Y663 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.41■■□□□ 1.34
HS3ST3A1Q9Y663 FOXO3B-201ENST00000395675 1928 ntBASIC23.41■■□□□ 1.34
HS3ST3A1Q9Y663 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HS3ST3A1Q9Y663 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
HS3ST3A1Q9Y663 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HS3ST3A1Q9Y663 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
HS3ST3A1Q9Y663 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.4■■□□□ 1.34
HS3ST3A1Q9Y663 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.4■■□□□ 1.34
HS3ST3A1Q9Y663 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
HS3ST3A1Q9Y663 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
HS3ST3A1Q9Y663 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.39■■□□□ 1.34
HS3ST3A1Q9Y663 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HS3ST3A1Q9Y663 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HS3ST3A1Q9Y663 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
HS3ST3A1Q9Y663 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HS3ST3A1Q9Y663 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
HS3ST3A1Q9Y663 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
HS3ST3A1Q9Y663 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.38■■□□□ 1.33
HS3ST3A1Q9Y663 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.38■■□□□ 1.33
HS3ST3A1Q9Y663 KRT16P3-201ENST00000439127 1283 ntBASIC23.38■■□□□ 1.33
HS3ST3A1Q9Y663 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.38■■□□□ 1.33
HS3ST3A1Q9Y663 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HS3ST3A1Q9Y663 AC097639.1-201ENST00000565519 1891 ntBASIC23.37■■□□□ 1.33
HS3ST3A1Q9Y663 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HS3ST3A1Q9Y663 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.37■■□□□ 1.33
HS3ST3A1Q9Y663 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms