Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 MIR638-201ENST00000385237 100 ntBASIC26.5■■□□□ 1.83
SCN10AQ9Y5Y9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 AL117332.1-201ENST00000622628 974 ntBASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SCN10AQ9Y5Y9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SCN10AQ9Y5Y9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SCN10AQ9Y5Y9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
SCN10AQ9Y5Y9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SCN10AQ9Y5Y9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.47■■□□□ 1.83
SCN10AQ9Y5Y9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.47■■□□□ 1.83
SCN10AQ9Y5Y9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
SCN10AQ9Y5Y9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SCN10AQ9Y5Y9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SCN10AQ9Y5Y9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SCN10AQ9Y5Y9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
SCN10AQ9Y5Y9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SCN10AQ9Y5Y9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.46■■□□□ 1.83
SCN10AQ9Y5Y9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
SCN10AQ9Y5Y9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SCN10AQ9Y5Y9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SCN10AQ9Y5Y9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SCN10AQ9Y5Y9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SCN10AQ9Y5Y9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SCN10AQ9Y5Y9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.45■■□□□ 1.82
SCN10AQ9Y5Y9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 MIR3621-201ENST00000580529 85 ntBASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 MIR6724-1-201ENST00000616420 92 ntBASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 MIR6724-2-201ENST00000616483 92 ntBASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 MIR6724-4-201ENST00000617390 92 ntBASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 MIR6724-3-201ENST00000622482 92 ntBASIC26.44■■□□□ 1.82
SCN10AQ9Y5Y9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.43■■□□□ 1.82
SCN10AQ9Y5Y9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC26.43■■□□□ 1.82
SCN10AQ9Y5Y9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCN10AQ9Y5Y9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.42■■□□□ 1.82
SCN10AQ9Y5Y9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.42■■□□□ 1.82
SCN10AQ9Y5Y9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCN10AQ9Y5Y9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCN10AQ9Y5Y9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCN10AQ9Y5Y9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.42■■□□□ 1.82
SCN10AQ9Y5Y9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SCN10AQ9Y5Y9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCN10AQ9Y5Y9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCN10AQ9Y5Y9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
SCN10AQ9Y5Y9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SCN10AQ9Y5Y9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 MTDHP2-201ENST00000601468 714 ntBASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 AL512631.2-201ENST00000604634 923 ntBASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 AC110285.6-201ENST00000617652 491 ntBASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.4■■□□□ 1.82
SCN10AQ9Y5Y9 AF131216.4-201ENST00000638924 1588 ntBASIC26.39■■□□□ 1.82
SCN10AQ9Y5Y9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC26.39■■□□□ 1.82
SCN10AQ9Y5Y9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.39■■□□□ 1.82
SCN10AQ9Y5Y9 AC010997.5-201ENST00000609182 354 ntBASIC26.39■■□□□ 1.82
SCN10AQ9Y5Y9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCN10AQ9Y5Y9 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SCN10AQ9Y5Y9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
SCN10AQ9Y5Y9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.38■■□□□ 1.81
SCN10AQ9Y5Y9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SCN10AQ9Y5Y9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SCN10AQ9Y5Y9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SCN10AQ9Y5Y9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC26.38■■□□□ 1.81
SCN10AQ9Y5Y9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SCN10AQ9Y5Y9 MIR4466-201ENST00000606121 54 ntBASIC26.38■■□□□ 1.81
SCN10AQ9Y5Y9 AC142086.6-201ENST00000621154 1765 ntBASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
SCN10AQ9Y5Y9 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 253.4 ms