Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC36.67■■■■□ 3.46
CDC42BPBQ9Y5S2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC36.67■■■■□ 3.46
CDC42BPBQ9Y5S2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC36.67■■■■□ 3.46
CDC42BPBQ9Y5S2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC36.67■■■■□ 3.46
CDC42BPBQ9Y5S2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC36.66■■■■□ 3.46
CDC42BPBQ9Y5S2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC36.66■■■■□ 3.46
CDC42BPBQ9Y5S2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
CDC42BPBQ9Y5S2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC36.66■■■■□ 3.46
CDC42BPBQ9Y5S2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC36.66■■■■□ 3.46
CDC42BPBQ9Y5S2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC36.66■■■■□ 3.46
CDC42BPBQ9Y5S2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
CDC42BPBQ9Y5S2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC36.65■■■■□ 3.46
CDC42BPBQ9Y5S2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC36.65■■■■□ 3.46
CDC42BPBQ9Y5S2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC36.65■■■■□ 3.46
CDC42BPBQ9Y5S2 MTDHP2-201ENST00000601468 714 ntBASIC36.65■■■■□ 3.46
CDC42BPBQ9Y5S2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC36.65■■■■□ 3.46
CDC42BPBQ9Y5S2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC36.64■■■■□ 3.46
CDC42BPBQ9Y5S2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
CDC42BPBQ9Y5S2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.46
CDC42BPBQ9Y5S2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC36.63■■■■□ 3.45
CDC42BPBQ9Y5S2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC36.63■■■■□ 3.45
CDC42BPBQ9Y5S2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC36.63■■■■□ 3.45
CDC42BPBQ9Y5S2 AC010997.5-201ENST00000609182 354 ntBASIC36.62■■■■□ 3.45
CDC42BPBQ9Y5S2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC36.62■■■■□ 3.45
CDC42BPBQ9Y5S2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC36.62■■■■□ 3.45
CDC42BPBQ9Y5S2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC36.62■■■■□ 3.45
CDC42BPBQ9Y5S2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC36.62■■■■□ 3.45
CDC42BPBQ9Y5S2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC36.62■■■■□ 3.45
CDC42BPBQ9Y5S2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC36.61■■■■□ 3.45
CDC42BPBQ9Y5S2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC36.61■■■■□ 3.45
CDC42BPBQ9Y5S2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
CDC42BPBQ9Y5S2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC36.6■■■■□ 3.45
CDC42BPBQ9Y5S2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC36.6■■■■□ 3.45
CDC42BPBQ9Y5S2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC36.6■■■■□ 3.45
CDC42BPBQ9Y5S2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC36.59■■■■□ 3.45
CDC42BPBQ9Y5S2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC36.59■■■■□ 3.45
CDC42BPBQ9Y5S2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC36.59■■■■□ 3.45
CDC42BPBQ9Y5S2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC36.59■■■■□ 3.45
CDC42BPBQ9Y5S2 RASSF1-AS1-201ENST00000629828 790 ntBASIC36.59■■■■□ 3.45
CDC42BPBQ9Y5S2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC36.59■■■■□ 3.45
CDC42BPBQ9Y5S2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC36.58■■■■□ 3.45
CDC42BPBQ9Y5S2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC36.58■■■■□ 3.45
CDC42BPBQ9Y5S2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
CDC42BPBQ9Y5S2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC36.58■■■■□ 3.45
CDC42BPBQ9Y5S2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
CDC42BPBQ9Y5S2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC36.58■■■■□ 3.45
CDC42BPBQ9Y5S2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC36.58■■■■□ 3.45
CDC42BPBQ9Y5S2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC36.57■■■■□ 3.44
CDC42BPBQ9Y5S2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
CDC42BPBQ9Y5S2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC36.56■■■■□ 3.44
CDC42BPBQ9Y5S2 AF131216.4-201ENST00000638924 1588 ntBASIC36.56■■■■□ 3.44
CDC42BPBQ9Y5S2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
CDC42BPBQ9Y5S2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC36.55■■■■□ 3.44
CDC42BPBQ9Y5S2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC36.55■■■■□ 3.44
CDC42BPBQ9Y5S2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC36.55■■■■□ 3.44
CDC42BPBQ9Y5S2 AP004609.3-201ENST00000610705 1884 ntBASIC36.55■■■■□ 3.44
CDC42BPBQ9Y5S2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC36.54■■■■□ 3.44
CDC42BPBQ9Y5S2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC36.54■■■■□ 3.44
CDC42BPBQ9Y5S2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC36.54■■■■□ 3.44
CDC42BPBQ9Y5S2 AC139426.1-201ENST00000568218 2529 ntBASIC36.53■■■■□ 3.44
CDC42BPBQ9Y5S2 GAK-223ENST00000628912 497 ntTSL 5 BASIC36.53■■■■□ 3.44
CDC42BPBQ9Y5S2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC36.53■■■■□ 3.44
CDC42BPBQ9Y5S2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC36.52■■■■□ 3.44
CDC42BPBQ9Y5S2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
CDC42BPBQ9Y5S2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
CDC42BPBQ9Y5S2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
CDC42BPBQ9Y5S2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC36.51■■■■□ 3.44
CDC42BPBQ9Y5S2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC36.51■■■■□ 3.44
CDC42BPBQ9Y5S2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
CDC42BPBQ9Y5S2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
CDC42BPBQ9Y5S2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC36.5■■■■□ 3.43
CDC42BPBQ9Y5S2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
CDC42BPBQ9Y5S2 AC096631.2-201ENST00000436136 790 ntBASIC36.5■■■■□ 3.43
CDC42BPBQ9Y5S2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC36.49■■■■□ 3.43
CDC42BPBQ9Y5S2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CDC42BPBQ9Y5S2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC36.49■■■■□ 3.43
CDC42BPBQ9Y5S2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CDC42BPBQ9Y5S2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC36.48■■■■□ 3.43
CDC42BPBQ9Y5S2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC36.48■■■■□ 3.43
CDC42BPBQ9Y5S2 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC36.48■■■■□ 3.43
CDC42BPBQ9Y5S2 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
CDC42BPBQ9Y5S2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
CDC42BPBQ9Y5S2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC36.47■■■■□ 3.43
CDC42BPBQ9Y5S2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC36.47■■■■□ 3.43
CDC42BPBQ9Y5S2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC36.46■■■■□ 3.43
CDC42BPBQ9Y5S2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
CDC42BPBQ9Y5S2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
CDC42BPBQ9Y5S2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC36.46■■■■□ 3.43
CDC42BPBQ9Y5S2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
CDC42BPBQ9Y5S2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC36.45■■■■□ 3.43
CDC42BPBQ9Y5S2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CDC42BPBQ9Y5S2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CDC42BPBQ9Y5S2 CD72-202ENST00000378430 585 ntTSL 3 BASIC36.43■■■■□ 3.42
CDC42BPBQ9Y5S2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC36.43■■■■□ 3.42
CDC42BPBQ9Y5S2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC36.43■■■■□ 3.42
CDC42BPBQ9Y5S2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CDC42BPBQ9Y5S2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
CDC42BPBQ9Y5S2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC36.41■■■■□ 3.42
CDC42BPBQ9Y5S2 SNX5-217ENST00000606557 1087 ntBASIC36.41■■■■□ 3.42
CDC42BPBQ9Y5S2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC36.41■■■■□ 3.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms