Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PCDHB1Q9Y5F3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB1Q9Y5F3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHB1Q9Y5F3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
PCDHB1Q9Y5F3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB1Q9Y5F3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
PCDHB1Q9Y5F3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB1Q9Y5F3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB1Q9Y5F3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHB1Q9Y5F3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PCDHB1Q9Y5F3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB1Q9Y5F3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PCDHB1Q9Y5F3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB1Q9Y5F3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
PCDHB1Q9Y5F3 AC131212.1-201ENST00000613771 668 ntBASIC23.74■■□□□ 1.39
PCDHB1Q9Y5F3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB1Q9Y5F3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB1Q9Y5F3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB1Q9Y5F3 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB1Q9Y5F3 AC018755.3-202ENST00000596210 929 ntBASIC23.73■■□□□ 1.39
PCDHB1Q9Y5F3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB1Q9Y5F3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB1Q9Y5F3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB1Q9Y5F3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHB1Q9Y5F3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB1Q9Y5F3 AC020928.2-201ENST00000588717 2197 ntBASIC23.72■■□□□ 1.39
PCDHB1Q9Y5F3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB1Q9Y5F3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB1Q9Y5F3 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB1Q9Y5F3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB1Q9Y5F3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB1Q9Y5F3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB1Q9Y5F3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.7■■□□□ 1.39
PCDHB1Q9Y5F3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB1Q9Y5F3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHB1Q9Y5F3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHB1Q9Y5F3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB1Q9Y5F3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHB1Q9Y5F3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHB1Q9Y5F3 AC097639.1-201ENST00000565519 1891 ntBASIC23.69■■□□□ 1.38
PCDHB1Q9Y5F3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB1Q9Y5F3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB1Q9Y5F3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.69■■□□□ 1.38
PCDHB1Q9Y5F3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHB1Q9Y5F3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 AC019069.1-201ENST00000610008 1333 ntBASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 GUSBP5-201ENST00000418136 578 ntBASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 THA1P-201ENST00000590384 1145 ntBASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB1Q9Y5F3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.67■■□□□ 1.38
PCDHB1Q9Y5F3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB1Q9Y5F3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB1Q9Y5F3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB1Q9Y5F3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHB1Q9Y5F3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB1Q9Y5F3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB1Q9Y5F3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHB1Q9Y5F3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB1Q9Y5F3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB1Q9Y5F3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB1Q9Y5F3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB1Q9Y5F3 MIR4508-201ENST00000584178 70 ntBASIC23.65■■□□□ 1.38
PCDHB1Q9Y5F3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB1Q9Y5F3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB1Q9Y5F3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
PCDHB1Q9Y5F3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDHB1Q9Y5F3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.64■■□□□ 1.38
PCDHB1Q9Y5F3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB1Q9Y5F3 KRT18P10-201ENST00000388836 1287 ntBASIC23.64■■□□□ 1.37
PCDHB1Q9Y5F3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB1Q9Y5F3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB1Q9Y5F3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB1Q9Y5F3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms