Protein–RNA interactions for Protein: Q9Y5B9

SUPT16H, FACT complex subunit SPT16, humanhuman

Known RBP Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16HQ9Y5B9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SUPT16HQ9Y5B9 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SUPT16HQ9Y5B9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SUPT16HQ9Y5B9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SUPT16HQ9Y5B9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SUPT16HQ9Y5B9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
SUPT16HQ9Y5B9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC31.48■■■□□ 2.63
SUPT16HQ9Y5B9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SUPT16HQ9Y5B9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SUPT16HQ9Y5B9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SUPT16HQ9Y5B9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SUPT16HQ9Y5B9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.47■■■□□ 2.63
SUPT16HQ9Y5B9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
SUPT16HQ9Y5B9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SUPT16HQ9Y5B9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
SUPT16HQ9Y5B9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
SUPT16HQ9Y5B9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SUPT16HQ9Y5B9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SUPT16HQ9Y5B9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
SUPT16HQ9Y5B9 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SUPT16HQ9Y5B9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
SUPT16HQ9Y5B9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
SUPT16HQ9Y5B9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.45■■■□□ 2.63
SUPT16HQ9Y5B9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.45■■■□□ 2.62
SUPT16HQ9Y5B9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SUPT16HQ9Y5B9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SUPT16HQ9Y5B9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SUPT16HQ9Y5B9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
SUPT16HQ9Y5B9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SUPT16HQ9Y5B9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SUPT16HQ9Y5B9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SUPT16HQ9Y5B9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
SUPT16HQ9Y5B9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.43■■■□□ 2.62
SUPT16HQ9Y5B9 AL162393.1-201ENST00000437852 946 ntBASIC31.43■■■□□ 2.62
SUPT16HQ9Y5B9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC31.43■■■□□ 2.62
SUPT16HQ9Y5B9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
SUPT16HQ9Y5B9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SUPT16HQ9Y5B9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC31.42■■■□□ 2.62
SUPT16HQ9Y5B9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SUPT16HQ9Y5B9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SUPT16HQ9Y5B9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SUPT16HQ9Y5B9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
SUPT16HQ9Y5B9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.42■■■□□ 2.62
SUPT16HQ9Y5B9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SUPT16HQ9Y5B9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SUPT16HQ9Y5B9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SUPT16HQ9Y5B9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
SUPT16HQ9Y5B9 AC044849.2-201ENST00000606596 710 ntBASIC31.41■■■□□ 2.62
SUPT16HQ9Y5B9 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
SUPT16HQ9Y5B9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
SUPT16HQ9Y5B9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SUPT16HQ9Y5B9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SUPT16HQ9Y5B9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SUPT16HQ9Y5B9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SUPT16HQ9Y5B9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SUPT16HQ9Y5B9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.38■■■□□ 2.61
SUPT16HQ9Y5B9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC31.38■■■□□ 2.61
SUPT16HQ9Y5B9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC31.38■■■□□ 2.61
SUPT16HQ9Y5B9 AP003733.4-201ENST00000623785 1697 ntBASIC31.38■■■□□ 2.61
SUPT16HQ9Y5B9 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
SUPT16HQ9Y5B9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SUPT16HQ9Y5B9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SUPT16HQ9Y5B9 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
SUPT16HQ9Y5B9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SUPT16HQ9Y5B9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SUPT16HQ9Y5B9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SUPT16HQ9Y5B9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SUPT16HQ9Y5B9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SUPT16HQ9Y5B9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SUPT16HQ9Y5B9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
SUPT16HQ9Y5B9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
SUPT16HQ9Y5B9 DUX4L29-201ENST00000425409 679 ntBASIC31.34■■■□□ 2.61
SUPT16HQ9Y5B9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
SUPT16HQ9Y5B9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SUPT16HQ9Y5B9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SUPT16HQ9Y5B9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SUPT16HQ9Y5B9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.33■■■□□ 2.61
SUPT16HQ9Y5B9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.33■■■□□ 2.61
SUPT16HQ9Y5B9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SUPT16HQ9Y5B9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SUPT16HQ9Y5B9 AL359504.2-201ENST00000605506 1601 ntBASIC31.32■■■□□ 2.6
SUPT16HQ9Y5B9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SUPT16HQ9Y5B9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.32■■■□□ 2.6
SUPT16HQ9Y5B9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SUPT16HQ9Y5B9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SUPT16HQ9Y5B9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SUPT16HQ9Y5B9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SUPT16HQ9Y5B9 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.31■■■□□ 2.6
SUPT16HQ9Y5B9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SUPT16HQ9Y5B9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SUPT16HQ9Y5B9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC31.3■■■□□ 2.6
SUPT16HQ9Y5B9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms