Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.33■□□□□ 0.21
LINC00588Q9Y4M8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LINC00588Q9Y4M8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00588Q9Y4M8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00588Q9Y4M8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00588Q9Y4M8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00588Q9Y4M8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00588Q9Y4M8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC00588Q9Y4M8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC00588Q9Y4M8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 KRT18P24-201ENST00000344739 1156 ntBASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 THA1P-201ENST00000590384 1145 ntBASIC16.32■□□□□ 0.2
LINC00588Q9Y4M8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 AC096887.2-201ENST00000623443 1957 ntBASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC00588Q9Y4M8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00588Q9Y4M8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
LINC00588Q9Y4M8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00588Q9Y4M8 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.3■□□□□ 0.2
LINC00588Q9Y4M8 AC120024.1-201ENST00000562672 995 ntBASIC16.3■□□□□ 0.2
LINC00588Q9Y4M8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC00588Q9Y4M8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00588Q9Y4M8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC00588Q9Y4M8 AC010501.1-201ENST00000606270 1962 ntBASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 AC092803.2-201ENST00000564287 1899 ntBASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 AC239859.2-201ENST00000444165 318 ntBASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LINC00588Q9Y4M8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC00588Q9Y4M8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 GUSBP5-201ENST00000418136 578 ntBASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 Z92544.1-202ENST00000571933 1220 ntBASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
LINC00588Q9Y4M8 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LINC00588Q9Y4M8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00588Q9Y4M8 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00588Q9Y4M8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00588Q9Y4M8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00588Q9Y4M8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
LINC00588Q9Y4M8 AC097639.1-201ENST00000565519 1891 ntBASIC16.27■□□□□ 0.19
LINC00588Q9Y4M8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00588Q9Y4M8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00588Q9Y4M8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00588Q9Y4M8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00588Q9Y4M8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00588Q9Y4M8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00588Q9Y4M8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00588Q9Y4M8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00588Q9Y4M8 FOXO3B-201ENST00000395675 1928 ntBASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 BX664725.1-201ENST00000438252 379 ntBASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00588Q9Y4M8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00588Q9Y4M8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms