Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EXOSC1Q9Y3B2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EXOSC1Q9Y3B2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXOSC1Q9Y3B2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 DUSP8P5-201ENST00000422884 1815 ntBASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXOSC1Q9Y3B2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EXOSC1Q9Y3B2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.14■□□□□ 0.98
EXOSC1Q9Y3B2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
EXOSC1Q9Y3B2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EXOSC1Q9Y3B2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EXOSC1Q9Y3B2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
EXOSC1Q9Y3B2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EXOSC1Q9Y3B2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.13■□□□□ 0.97
EXOSC1Q9Y3B2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
EXOSC1Q9Y3B2 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
EXOSC1Q9Y3B2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
EXOSC1Q9Y3B2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
EXOSC1Q9Y3B2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.13■□□□□ 0.97
EXOSC1Q9Y3B2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.13■□□□□ 0.97
EXOSC1Q9Y3B2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 LINC01971-201ENST00000617888 1048 ntBASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXOSC1Q9Y3B2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L13-201ENST00000554103 1267 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L15-201ENST00000611059 1267 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L23-201ENST00000615195 1269 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L24-201ENST00000617576 1269 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L22-201ENST00000618238 1269 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L20-201ENST00000619712 1269 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L21-201ENST00000622058 1269 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L10-201ENST00000622460 1267 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DUX4L25-201ENST00000624915 1269 ntBASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXOSC1Q9Y3B2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 AC079834.2-201ENST00000609776 1949 ntBASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.1■□□□□ 0.97
EXOSC1Q9Y3B2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
EXOSC1Q9Y3B2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms