Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH3Q9UM47 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NOTCH3Q9UM47 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH3Q9UM47 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH3Q9UM47 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH3Q9UM47 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NOTCH3Q9UM47 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.23■□□□□ 0.51
NOTCH3Q9UM47 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.22■□□□□ 0.51
NOTCH3Q9UM47 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NOTCH3Q9UM47 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NOTCH3Q9UM47 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.21■□□□□ 0.51
NOTCH3Q9UM47 AC120024.1-201ENST00000562672 995 ntBASIC18.21■□□□□ 0.51
NOTCH3Q9UM47 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.21■□□□□ 0.51
NOTCH3Q9UM47 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.21■□□□□ 0.51
NOTCH3Q9UM47 MIR4281-201ENST00000580852 62 ntBASIC18.21■□□□□ 0.51
NOTCH3Q9UM47 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NOTCH3Q9UM47 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.2■□□□□ 0.5
NOTCH3Q9UM47 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOTCH3Q9UM47 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOTCH3Q9UM47 AC021242.3-201ENST00000607598 1377 ntBASIC18.19■□□□□ 0.5
NOTCH3Q9UM47 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NOTCH3Q9UM47 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NOTCH3Q9UM47 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NOTCH3Q9UM47 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 TSPY9P-201ENST00000440215 945 ntBASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 TSPY11P-201ENST00000442607 1045 ntBASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NOTCH3Q9UM47 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 MIR4466-201ENST00000606121 54 ntBASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NOTCH3Q9UM47 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 AC005837.3-201ENST00000612163 286 ntBASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NOTCH3Q9UM47 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NOTCH3Q9UM47 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NOTCH3Q9UM47 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.14■□□□□ 0.49
NOTCH3Q9UM47 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NOTCH3Q9UM47 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NOTCH3Q9UM47 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NOTCH3Q9UM47 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 AL139246.5-201ENST00000606645 996 ntBASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.12■□□□□ 0.49
NOTCH3Q9UM47 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NOTCH3Q9UM47 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NOTCH3Q9UM47 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NOTCH3Q9UM47 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms