Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 AP003733.4-201ENST00000623785 1697 ntBASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LIN7CQ9NUP9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LIN7CQ9NUP9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LIN7CQ9NUP9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LIN7CQ9NUP9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.58■□□□□ 0.72
LIN7CQ9NUP9 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.57■□□□□ 0.72
LIN7CQ9NUP9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIN7CQ9NUP9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LIN7CQ9NUP9 AC097639.1-201ENST00000565519 1891 ntBASIC19.57■□□□□ 0.72
LIN7CQ9NUP9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.57■□□□□ 0.72
LIN7CQ9NUP9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIN7CQ9NUP9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.57■□□□□ 0.72
LIN7CQ9NUP9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LIN7CQ9NUP9 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.56■□□□□ 0.72
LIN7CQ9NUP9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN7CQ9NUP9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN7CQ9NUP9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN7CQ9NUP9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
LIN7CQ9NUP9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LIN7CQ9NUP9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
LIN7CQ9NUP9 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
LIN7CQ9NUP9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 RARRES2P2-201ENST00000394842 485 ntBASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.54■□□□□ 0.72
LIN7CQ9NUP9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
LIN7CQ9NUP9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.52■□□□□ 0.72
LIN7CQ9NUP9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIN7CQ9NUP9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.52■□□□□ 0.72
LIN7CQ9NUP9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIN7CQ9NUP9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LIN7CQ9NUP9 SMPD5-203ENST00000639008 1464 ntBASIC19.52■□□□□ 0.72
LIN7CQ9NUP9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LIN7CQ9NUP9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
LIN7CQ9NUP9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 AC025884.2-201ENST00000553429 711 ntBASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 LINC01124-201ENST00000409786 2117 ntBASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LIN7CQ9NUP9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LIN7CQ9NUP9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
LIN7CQ9NUP9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms