Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF146Q9NTX7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF146Q9NTX7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF146Q9NTX7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.29■■□□□ 1.96
RNF146Q9NTX7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.29■■□□□ 1.96
RNF146Q9NTX7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF146Q9NTX7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF146Q9NTX7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RNF146Q9NTX7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
RNF146Q9NTX7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RNF146Q9NTX7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF146Q9NTX7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.28■■□□□ 1.96
RNF146Q9NTX7 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.28■■□□□ 1.96
RNF146Q9NTX7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RNF146Q9NTX7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF146Q9NTX7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
RNF146Q9NTX7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.27■■□□□ 1.96
RNF146Q9NTX7 MIR4281-201ENST00000580852 62 ntBASIC27.27■■□□□ 1.96
RNF146Q9NTX7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
RNF146Q9NTX7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
RNF146Q9NTX7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
RNF146Q9NTX7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
RNF146Q9NTX7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RNF146Q9NTX7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
RNF146Q9NTX7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
RNF146Q9NTX7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.26■■□□□ 1.95
RNF146Q9NTX7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RNF146Q9NTX7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF146Q9NTX7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF146Q9NTX7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
RNF146Q9NTX7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RNF146Q9NTX7 UNC93B8-201ENST00000511903 705 ntBASIC27.25■■□□□ 1.95
RNF146Q9NTX7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.25■■□□□ 1.95
RNF146Q9NTX7 AC021242.3-201ENST00000607598 1377 ntBASIC27.24■■□□□ 1.95
RNF146Q9NTX7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.24■■□□□ 1.95
RNF146Q9NTX7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
RNF146Q9NTX7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.24■■□□□ 1.95
RNF146Q9NTX7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.24■■□□□ 1.95
RNF146Q9NTX7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RNF146Q9NTX7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RNF146Q9NTX7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
RNF146Q9NTX7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.23■■□□□ 1.95
RNF146Q9NTX7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.23■■□□□ 1.95
RNF146Q9NTX7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.23■■□□□ 1.95
RNF146Q9NTX7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RNF146Q9NTX7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.22■■□□□ 1.95
RNF146Q9NTX7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
RNF146Q9NTX7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
RNF146Q9NTX7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.22■■□□□ 1.95
RNF146Q9NTX7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RNF146Q9NTX7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
RNF146Q9NTX7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
RNF146Q9NTX7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
RNF146Q9NTX7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.21■■□□□ 1.95
RNF146Q9NTX7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.21■■□□□ 1.95
RNF146Q9NTX7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RNF146Q9NTX7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
RNF146Q9NTX7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.2■■□□□ 1.95
RNF146Q9NTX7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.2■■□□□ 1.95
RNF146Q9NTX7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RNF146Q9NTX7 AC011551.1-201ENST00000614101 683 ntBASIC27.2■■□□□ 1.94
RNF146Q9NTX7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
RNF146Q9NTX7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RNF146Q9NTX7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RNF146Q9NTX7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.19■■□□□ 1.94
RNF146Q9NTX7 TSPY9P-201ENST00000440215 945 ntBASIC27.19■■□□□ 1.94
RNF146Q9NTX7 TSPY11P-201ENST00000442607 1045 ntBASIC27.19■■□□□ 1.94
RNF146Q9NTX7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
RNF146Q9NTX7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 KRT16P3-201ENST00000439127 1283 ntBASIC27.18■■□□□ 1.94
RNF146Q9NTX7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.18■■□□□ 1.94
RNF146Q9NTX7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 ERN1-208ENST00000606895 2068 ntBASIC27.17■■□□□ 1.94
RNF146Q9NTX7 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RNF146Q9NTX7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.16■■□□□ 1.94
RNF146Q9NTX7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.16■■□□□ 1.94
RNF146Q9NTX7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RNF146Q9NTX7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RNF146Q9NTX7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RNF146Q9NTX7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.15■■□□□ 1.94
RNF146Q9NTX7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.15■■□□□ 1.94
RNF146Q9NTX7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.15■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms