Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
LRTM1Q9HBL6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
LRTM1Q9HBL6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.78■■□□□ 1.24
LRTM1Q9HBL6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
LRTM1Q9HBL6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.77■■□□□ 1.24
LRTM1Q9HBL6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.77■■□□□ 1.24
LRTM1Q9HBL6 AC093536.1-201ENST00000569153 554 ntBASIC22.77■■□□□ 1.24
LRTM1Q9HBL6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
LRTM1Q9HBL6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.77■■□□□ 1.24
LRTM1Q9HBL6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRTM1Q9HBL6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRTM1Q9HBL6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LRTM1Q9HBL6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.76■■□□□ 1.23
LRTM1Q9HBL6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
LRTM1Q9HBL6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRTM1Q9HBL6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LRTM1Q9HBL6 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.76■■□□□ 1.23
LRTM1Q9HBL6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRTM1Q9HBL6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.76■■□□□ 1.23
LRTM1Q9HBL6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRTM1Q9HBL6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LRTM1Q9HBL6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
LRTM1Q9HBL6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRTM1Q9HBL6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRTM1Q9HBL6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
LRTM1Q9HBL6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.75■■□□□ 1.23
LRTM1Q9HBL6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRTM1Q9HBL6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRTM1Q9HBL6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRTM1Q9HBL6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRTM1Q9HBL6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
LRTM1Q9HBL6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.74■■□□□ 1.23
LRTM1Q9HBL6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 AC007029.1-201ENST00000604183 313 ntBASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRTM1Q9HBL6 LINC01124-201ENST00000409786 2117 ntBASIC22.72■■□□□ 1.23
LRTM1Q9HBL6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.72■■□□□ 1.23
LRTM1Q9HBL6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.72■■□□□ 1.23
LRTM1Q9HBL6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.72■■□□□ 1.23
LRTM1Q9HBL6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRTM1Q9HBL6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
LRTM1Q9HBL6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.23
LRTM1Q9HBL6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRTM1Q9HBL6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRTM1Q9HBL6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRTM1Q9HBL6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRTM1Q9HBL6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRTM1Q9HBL6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRTM1Q9HBL6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 MIR4449-201ENST00000578365 66 ntBASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.69■■□□□ 1.22
LRTM1Q9HBL6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRTM1Q9HBL6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
LRTM1Q9HBL6 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.67■■□□□ 1.22
LRTM1Q9HBL6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRTM1Q9HBL6 GPX1-201ENST00000419349 1106 ntBASIC22.67■■□□□ 1.22
LRTM1Q9HBL6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
LRTM1Q9HBL6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
LRTM1Q9HBL6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRTM1Q9HBL6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRTM1Q9HBL6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LRTM1Q9HBL6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms