Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 WHAMMP2-203ENST00000563942 1603 ntBASIC6.39□□□□□ -1.39
LCE3DQ9BYE3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC6.39□□□□□ -1.39
LCE3DQ9BYE3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 LINC01124-201ENST00000409786 2117 ntBASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
LCE3DQ9BYE3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 EED-207ENST00000528180 1745 ntTSL 5 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 AP003733.4-201ENST00000623785 1697 ntBASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LCE3DQ9BYE3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 AC097639.1-201ENST00000565519 1891 ntBASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
LCE3DQ9BYE3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LCE3DQ9BYE3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms