Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.88■□□□□ 0.13
LITAFQ99732 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC15.88■□□□□ 0.13
LITAFQ99732 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LITAFQ99732 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LITAFQ99732 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LITAFQ99732 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LITAFQ99732 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC15.87■□□□□ 0.13
LITAFQ99732 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC15.87■□□□□ 0.13
LITAFQ99732 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
LITAFQ99732 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LITAFQ99732 LINC00565-201ENST00000562710 2331 ntBASIC15.86■□□□□ 0.13
LITAFQ99732 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LITAFQ99732 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LITAFQ99732 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LITAFQ99732 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LITAFQ99732 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LITAFQ99732 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LITAFQ99732 RPS2-209ENST00000529806 993 ntTSL 3 BASIC15.86■□□□□ 0.13
LITAFQ99732 CAHM-201ENST00000604200 896 ntBASIC15.86■□□□□ 0.13
LITAFQ99732 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
LITAFQ99732 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC15.86■□□□□ 0.13
LITAFQ99732 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LITAFQ99732 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LITAFQ99732 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LITAFQ99732 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
LITAFQ99732 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LITAFQ99732 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LITAFQ99732 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
LITAFQ99732 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LITAFQ99732 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LITAFQ99732 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.85■□□□□ 0.13
LITAFQ99732 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LITAFQ99732 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LITAFQ99732 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LITAFQ99732 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.85■□□□□ 0.13
LITAFQ99732 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LITAFQ99732 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
LITAFQ99732 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.84■□□□□ 0.13
LITAFQ99732 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.84■□□□□ 0.13
LITAFQ99732 EP400NL-214ENST00000641289 2402 ntBASIC15.84■□□□□ 0.13
LITAFQ99732 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC15.84■□□□□ 0.13
LITAFQ99732 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC15.84■□□□□ 0.13
LITAFQ99732 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LITAFQ99732 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LITAFQ99732 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LITAFQ99732 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.84■□□□□ 0.13
LITAFQ99732 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LITAFQ99732 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LITAFQ99732 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LITAFQ99732 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.83■□□□□ 0.12
LITAFQ99732 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC15.83■□□□□ 0.12
LITAFQ99732 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LITAFQ99732 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LITAFQ99732 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LITAFQ99732 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LITAFQ99732 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LITAFQ99732 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LITAFQ99732 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LITAFQ99732 AC108673.1-201ENST00000510422 1159 ntBASIC15.82■□□□□ 0.12
LITAFQ99732 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LITAFQ99732 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.82■□□□□ 0.12
LITAFQ99732 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.82■□□□□ 0.12
LITAFQ99732 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LITAFQ99732 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LITAFQ99732 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LITAFQ99732 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LITAFQ99732 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LITAFQ99732 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LITAFQ99732 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
LITAFQ99732 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LITAFQ99732 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LITAFQ99732 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LITAFQ99732 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LITAFQ99732 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC15.81■□□□□ 0.12
LITAFQ99732 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC15.81■□□□□ 0.12
LITAFQ99732 RARRES2P7-201ENST00000567349 469 ntBASIC15.81■□□□□ 0.12
LITAFQ99732 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.81■□□□□ 0.12
LITAFQ99732 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LITAFQ99732 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LITAFQ99732 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LITAFQ99732 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LITAFQ99732 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
LITAFQ99732 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LITAFQ99732 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LITAFQ99732 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LITAFQ99732 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LITAFQ99732 MIR762-201ENST00000390236 83 ntBASIC15.8■□□□□ 0.12
LITAFQ99732 MIR6090-201ENST00000622481 60 ntBASIC15.8■□□□□ 0.12
LITAFQ99732 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LITAFQ99732 AC233723.2-201ENST00000623798 2106 ntBASIC15.8■□□□□ 0.12
LITAFQ99732 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LITAFQ99732 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.8■□□□□ 0.12
LITAFQ99732 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LITAFQ99732 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC15.79■□□□□ 0.12
LITAFQ99732 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LITAFQ99732 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LITAFQ99732 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC15.79■□□□□ 0.12
LITAFQ99732 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
LITAFQ99732 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.79■□□□□ 0.12
LITAFQ99732 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms