Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.9■■□□□ 1.42
SMC6Q96SB8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.9■■□□□ 1.42
SMC6Q96SB8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC6Q96SB8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC6Q96SB8 AC012676.1-201ENST00000574705 1949 ntBASIC23.9■■□□□ 1.42
SMC6Q96SB8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC6Q96SB8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SMC6Q96SB8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.89■■□□□ 1.42
SMC6Q96SB8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
SMC6Q96SB8 LINC00543-201ENST00000567234 1845 ntBASIC23.89■■□□□ 1.42
SMC6Q96SB8 SLC6A10P-202ENST00000431994 2058 ntBASIC23.89■■□□□ 1.41
SMC6Q96SB8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.89■■□□□ 1.41
SMC6Q96SB8 AL359258.2-201ENST00000564063 1566 ntBASIC23.89■■□□□ 1.41
SMC6Q96SB8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.89■■□□□ 1.41
SMC6Q96SB8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC6Q96SB8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.88■■□□□ 1.41
SMC6Q96SB8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC6Q96SB8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SMC6Q96SB8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC6Q96SB8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC6Q96SB8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SMC6Q96SB8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC6Q96SB8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC6Q96SB8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC6Q96SB8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC6Q96SB8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SMC6Q96SB8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.86■■□□□ 1.41
SMC6Q96SB8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SMC6Q96SB8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC6Q96SB8 AC148477.6-201ENST00000623746 465 ntBASIC23.86■■□□□ 1.41
SMC6Q96SB8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SMC6Q96SB8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.86■■□□□ 1.41
SMC6Q96SB8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC6Q96SB8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SMC6Q96SB8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SMC6Q96SB8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC6Q96SB8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC6Q96SB8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SMC6Q96SB8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
SMC6Q96SB8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SMC6Q96SB8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SMC6Q96SB8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.85■■□□□ 1.41
SMC6Q96SB8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMC6Q96SB8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMC6Q96SB8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMC6Q96SB8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMC6Q96SB8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.84■■□□□ 1.41
SMC6Q96SB8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMC6Q96SB8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMC6Q96SB8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SMC6Q96SB8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMC6Q96SB8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SMC6Q96SB8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC6Q96SB8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.83■■□□□ 1.41
SMC6Q96SB8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC6Q96SB8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SMC6Q96SB8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SMC6Q96SB8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC6Q96SB8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC6Q96SB8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SMC6Q96SB8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SMC6Q96SB8 AC141586.4-201ENST00000624558 1573 ntBASIC23.82■■□□□ 1.4
SMC6Q96SB8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SMC6Q96SB8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMC6Q96SB8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.81■■□□□ 1.4
SMC6Q96SB8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.81■■□□□ 1.4
SMC6Q96SB8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.81■■□□□ 1.4
SMC6Q96SB8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.81■■□□□ 1.4
SMC6Q96SB8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SMC6Q96SB8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SMC6Q96SB8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC6Q96SB8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC6Q96SB8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC6Q96SB8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
SMC6Q96SB8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC6Q96SB8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC6Q96SB8 LINC01971-201ENST00000617888 1048 ntBASIC23.8■■□□□ 1.4
SMC6Q96SB8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.8■■□□□ 1.4
SMC6Q96SB8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SMC6Q96SB8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SMC6Q96SB8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
SMC6Q96SB8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.79■■□□□ 1.4
SMC6Q96SB8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SMC6Q96SB8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC6Q96SB8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SMC6Q96SB8 AC068473.5-201ENST00000616428 2072 ntBASIC23.79■■□□□ 1.4
SMC6Q96SB8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.79■■□□□ 1.4
SMC6Q96SB8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SMC6Q96SB8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms