Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CLCC1Q96S66 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCC1Q96S66 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLCC1Q96S66 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
CLCC1Q96S66 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCC1Q96S66 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCC1Q96S66 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCC1Q96S66 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCC1Q96S66 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCC1Q96S66 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCC1Q96S66 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.74■□□□□ 0.75
CLCC1Q96S66 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLCC1Q96S66 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCC1Q96S66 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCC1Q96S66 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCC1Q96S66 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCC1Q96S66 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCC1Q96S66 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.73■□□□□ 0.75
CLCC1Q96S66 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.73■□□□□ 0.75
CLCC1Q96S66 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCC1Q96S66 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCC1Q96S66 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CLCC1Q96S66 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCC1Q96S66 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCC1Q96S66 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.72■□□□□ 0.75
CLCC1Q96S66 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCC1Q96S66 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCC1Q96S66 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CLCC1Q96S66 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCC1Q96S66 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCC1Q96S66 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 PKD1P6-201ENST00000343738 4769 ntBASIC19.71■□□□□ 0.75
CLCC1Q96S66 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCC1Q96S66 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCC1Q96S66 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLCC1Q96S66 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCC1Q96S66 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CLCC1Q96S66 AL359258.2-201ENST00000564063 1566 ntBASIC19.7■□□□□ 0.74
CLCC1Q96S66 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCC1Q96S66 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CLCC1Q96S66 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.7■□□□□ 0.74
CLCC1Q96S66 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLCC1Q96S66 AC079834.2-201ENST00000609776 1949 ntBASIC19.7■□□□□ 0.74
CLCC1Q96S66 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCC1Q96S66 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCC1Q96S66 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.7■□□□□ 0.74
CLCC1Q96S66 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCC1Q96S66 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCC1Q96S66 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CLCC1Q96S66 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCC1Q96S66 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCC1Q96S66 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCC1Q96S66 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCC1Q96S66 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCC1Q96S66 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCC1Q96S66 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCC1Q96S66 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCC1Q96S66 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCC1Q96S66 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCC1Q96S66 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCC1Q96S66 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCC1Q96S66 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLCC1Q96S66 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCC1Q96S66 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCC1Q96S66 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLCC1Q96S66 MIR639-201ENST00000384974 98 ntBASIC19.67■□□□□ 0.74
CLCC1Q96S66 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCC1Q96S66 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLCC1Q96S66 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.67■□□□□ 0.74
CLCC1Q96S66 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCC1Q96S66 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCC1Q96S66 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCC1Q96S66 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLCC1Q96S66 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCC1Q96S66 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCC1Q96S66 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLCC1Q96S66 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLCC1Q96S66 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.66■□□□□ 0.74
CLCC1Q96S66 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.65■□□□□ 0.74
CLCC1Q96S66 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCC1Q96S66 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCC1Q96S66 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCC1Q96S66 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCC1Q96S66 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLCC1Q96S66 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCC1Q96S66 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCC1Q96S66 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.64■□□□□ 0.74
CLCC1Q96S66 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CLCC1Q96S66 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.64■□□□□ 0.73
CLCC1Q96S66 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms