Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DUX4L29-201ENST00000425409 679 ntBASIC19.15■□□□□ 0.66
RAB40CQ96S21 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40CQ96S21 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB40CQ96S21 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB40CQ96S21 DUSP8P5-201ENST00000422884 1815 ntBASIC19.14■□□□□ 0.65
RAB40CQ96S21 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40CQ96S21 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RAB40CQ96S21 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40CQ96S21 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40CQ96S21 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB40CQ96S21 AL359504.2-201ENST00000605506 1601 ntBASIC19.14■□□□□ 0.65
RAB40CQ96S21 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB40CQ96S21 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RAB40CQ96S21 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40CQ96S21 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40CQ96S21 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.13■□□□□ 0.65
RAB40CQ96S21 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RAB40CQ96S21 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB40CQ96S21 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB40CQ96S21 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB40CQ96S21 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RAB40CQ96S21 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RAB40CQ96S21 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAB40CQ96S21 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40CQ96S21 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAB40CQ96S21 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RAB40CQ96S21 AC008813.1-201ENST00000536597 885 ntBASIC19.12■□□□□ 0.65
RAB40CQ96S21 AC021231.2-201ENST00000594613 730 ntBASIC19.12■□□□□ 0.65
RAB40CQ96S21 AC079834.2-201ENST00000609776 1949 ntBASIC19.12■□□□□ 0.65
RAB40CQ96S21 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40CQ96S21 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40CQ96S21 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40CQ96S21 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40CQ96S21 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40CQ96S21 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40CQ96S21 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.11■□□□□ 0.65
RAB40CQ96S21 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAB40CQ96S21 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.1■□□□□ 0.65
RAB40CQ96S21 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 MIR219A2-201ENST00000608502 1504 ntBASIC19.1■□□□□ 0.65
RAB40CQ96S21 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAB40CQ96S21 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40CQ96S21 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40CQ96S21 AL359258.2-201ENST00000564063 1566 ntBASIC19.09■□□□□ 0.65
RAB40CQ96S21 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RAB40CQ96S21 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAB40CQ96S21 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.08■□□□□ 0.65
RAB40CQ96S21 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40CQ96S21 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40CQ96S21 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40CQ96S21 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.08■□□□□ 0.65
RAB40CQ96S21 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RAB40CQ96S21 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAB40CQ96S21 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40CQ96S21 AC148477.6-201ENST00000623746 465 ntBASIC19.08■□□□□ 0.64
RAB40CQ96S21 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.08■□□□□ 0.64
RAB40CQ96S21 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40CQ96S21 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAB40CQ96S21 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40CQ96S21 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40CQ96S21 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40CQ96S21 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40CQ96S21 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.07■□□□□ 0.64
RAB40CQ96S21 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAB40CQ96S21 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40CQ96S21 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
RAB40CQ96S21 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB40CQ96S21 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.06■□□□□ 0.64
RAB40CQ96S21 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB40CQ96S21 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40CQ96S21 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40CQ96S21 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAB40CQ96S21 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.06■□□□□ 0.64
RAB40CQ96S21 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAB40CQ96S21 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RAB40CQ96S21 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.05■□□□□ 0.64
RAB40CQ96S21 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RAB40CQ96S21 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAB40CQ96S21 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms