Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31.47■■■□□ 2.63
PHACTR3Q96KR7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PHACTR3Q96KR7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
PHACTR3Q96KR7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.63
PHACTR3Q96KR7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PHACTR3Q96KR7 AC010501.1-201ENST00000606270 1962 ntBASIC31.45■■■□□ 2.62
PHACTR3Q96KR7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
PHACTR3Q96KR7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
PHACTR3Q96KR7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PHACTR3Q96KR7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PHACTR3Q96KR7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.43■■■□□ 2.62
PHACTR3Q96KR7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
PHACTR3Q96KR7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.43■■■□□ 2.62
PHACTR3Q96KR7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.43■■■□□ 2.62
PHACTR3Q96KR7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PHACTR3Q96KR7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PHACTR3Q96KR7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
PHACTR3Q96KR7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PHACTR3Q96KR7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC31.42■■■□□ 2.62
PHACTR3Q96KR7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PHACTR3Q96KR7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
PHACTR3Q96KR7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PHACTR3Q96KR7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.41■■■□□ 2.62
PHACTR3Q96KR7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHACTR3Q96KR7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHACTR3Q96KR7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHACTR3Q96KR7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PHACTR3Q96KR7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PHACTR3Q96KR7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PHACTR3Q96KR7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PHACTR3Q96KR7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
PHACTR3Q96KR7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
PHACTR3Q96KR7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
PHACTR3Q96KR7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
PHACTR3Q96KR7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
PHACTR3Q96KR7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.39■■■□□ 2.62
PHACTR3Q96KR7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
PHACTR3Q96KR7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PHACTR3Q96KR7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.38■■■□□ 2.61
PHACTR3Q96KR7 AC022616.5-201ENST00000518796 181 ntBASIC31.38■■■□□ 2.61
PHACTR3Q96KR7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC31.38■■■□□ 2.61
PHACTR3Q96KR7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.38■■■□□ 2.61
PHACTR3Q96KR7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
PHACTR3Q96KR7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PHACTR3Q96KR7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.36■■■□□ 2.61
PHACTR3Q96KR7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
PHACTR3Q96KR7 AC091060.1-201ENST00000623524 1766 ntBASIC31.35■■■□□ 2.61
PHACTR3Q96KR7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC31.35■■■□□ 2.61
PHACTR3Q96KR7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.35■■■□□ 2.61
PHACTR3Q96KR7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PHACTR3Q96KR7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.35■■■□□ 2.61
PHACTR3Q96KR7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 KRT18P24-201ENST00000344739 1156 ntBASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 AC120024.1-201ENST00000562672 995 ntBASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PHACTR3Q96KR7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PHACTR3Q96KR7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.33■■■□□ 2.61
PHACTR3Q96KR7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PHACTR3Q96KR7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PHACTR3Q96KR7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
PHACTR3Q96KR7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.33■■■□□ 2.61
PHACTR3Q96KR7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.32■■■□□ 2.6
PHACTR3Q96KR7 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.32■■■□□ 2.6
PHACTR3Q96KR7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PHACTR3Q96KR7 AC097639.1-201ENST00000565519 1891 ntBASIC31.31■■■□□ 2.6
PHACTR3Q96KR7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.3■■■□□ 2.6
PHACTR3Q96KR7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
PHACTR3Q96KR7 AL592295.1-201ENST00000400984 884 ntBASIC31.3■■■□□ 2.6
PHACTR3Q96KR7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.3■■■□□ 2.6
PHACTR3Q96KR7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PHACTR3Q96KR7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHACTR3Q96KR7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
PHACTR3Q96KR7 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.29■■■□□ 2.6
PHACTR3Q96KR7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHACTR3Q96KR7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.28■■■□□ 2.6
PHACTR3Q96KR7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PHACTR3Q96KR7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PHACTR3Q96KR7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PHACTR3Q96KR7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.28■■■□□ 2.6
PHACTR3Q96KR7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PHACTR3Q96KR7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
PHACTR3Q96KR7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PHACTR3Q96KR7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.27■■■□□ 2.6
PHACTR3Q96KR7 DUSP8P4-201ENST00000399538 1761 ntBASIC31.27■■■□□ 2.6
PHACTR3Q96KR7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
PHACTR3Q96KR7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms