Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF170Q96K19 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
RNF170Q96K19 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RNF170Q96K19 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF170Q96K19 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF170Q96K19 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF170Q96K19 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF170Q96K19 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF170Q96K19 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF170Q96K19 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF170Q96K19 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
RNF170Q96K19 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF170Q96K19 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF170Q96K19 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF170Q96K19 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF170Q96K19 AL359504.2-201ENST00000605506 1601 ntBASIC20.89■□□□□ 0.93
RNF170Q96K19 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.88■□□□□ 0.93
RNF170Q96K19 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF170Q96K19 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF170Q96K19 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF170Q96K19 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF170Q96K19 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF170Q96K19 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF170Q96K19 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF170Q96K19 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RNF170Q96K19 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF170Q96K19 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF170Q96K19 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF170Q96K19 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.87■□□□□ 0.93
RNF170Q96K19 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF170Q96K19 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF170Q96K19 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF170Q96K19 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF170Q96K19 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF170Q96K19 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF170Q96K19 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF170Q96K19 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF170Q96K19 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF170Q96K19 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF170Q96K19 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RNF170Q96K19 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF170Q96K19 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF170Q96K19 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF170Q96K19 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF170Q96K19 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF170Q96K19 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF170Q96K19 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF170Q96K19 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF170Q96K19 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RNF170Q96K19 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF170Q96K19 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF170Q96K19 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF170Q96K19 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF170Q96K19 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
RNF170Q96K19 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF170Q96K19 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF170Q96K19 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF170Q96K19 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF170Q96K19 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF170Q96K19 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF170Q96K19 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RNF170Q96K19 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
RNF170Q96K19 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF170Q96K19 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF170Q96K19 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF170Q96K19 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
RNF170Q96K19 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
RNF170Q96K19 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF170Q96K19 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF170Q96K19 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF170Q96K19 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF170Q96K19 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF170Q96K19 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF170Q96K19 AC138932.3-201ENST00000567634 1902 ntBASIC20.82■□□□□ 0.92
RNF170Q96K19 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF170Q96K19 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF170Q96K19 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF170Q96K19 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF170Q96K19 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF170Q96K19 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF170Q96K19 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF170Q96K19 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF170Q96K19 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF170Q96K19 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF170Q96K19 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF170Q96K19 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF170Q96K19 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF170Q96K19 AL024507.2-201ENST00000606070 2574 ntBASIC20.8■□□□□ 0.92
RNF170Q96K19 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF170Q96K19 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms