Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRC46Q96FV0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LRRC46Q96FV0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC46Q96FV0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LRRC46Q96FV0 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC46Q96FV0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
LRRC46Q96FV0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRC46Q96FV0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 AL356441.2-201ENST00000443009 864 ntBASIC21.18■□□□□ 0.98
LRRC46Q96FV0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LRRC46Q96FV0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC46Q96FV0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC46Q96FV0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC46Q96FV0 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC46Q96FV0 AL592295.1-201ENST00000400984 884 ntBASIC21.17■□□□□ 0.98
LRRC46Q96FV0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRC46Q96FV0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRC46Q96FV0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC46Q96FV0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC46Q96FV0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.16■□□□□ 0.98
LRRC46Q96FV0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC46Q96FV0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC46Q96FV0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRC46Q96FV0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRRC46Q96FV0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LRRC46Q96FV0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC46Q96FV0 LINC01003-201ENST00000564834 1764 ntBASIC21.15■□□□□ 0.98
LRRC46Q96FV0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRC46Q96FV0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC46Q96FV0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.15■□□□□ 0.98
LRRC46Q96FV0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRC46Q96FV0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC46Q96FV0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRC46Q96FV0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRRC46Q96FV0 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.14■□□□□ 0.98
LRRC46Q96FV0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRRC46Q96FV0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRC46Q96FV0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LRRC46Q96FV0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC46Q96FV0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC46Q96FV0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC46Q96FV0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC46Q96FV0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRC46Q96FV0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRRC46Q96FV0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
LRRC46Q96FV0 DRD5P2-201ENST00000421395 2012 ntBASIC21.13■□□□□ 0.97
LRRC46Q96FV0 KRT18P24-201ENST00000344739 1156 ntBASIC21.13■□□□□ 0.97
LRRC46Q96FV0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRC46Q96FV0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.13■□□□□ 0.97
LRRC46Q96FV0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.13■□□□□ 0.97
LRRC46Q96FV0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRC46Q96FV0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.12■□□□□ 0.97
LRRC46Q96FV0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC46Q96FV0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
LRRC46Q96FV0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.12■□□□□ 0.97
LRRC46Q96FV0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LRRC46Q96FV0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRC46Q96FV0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
LRRC46Q96FV0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 MIR4787-201ENST00000607364 84 ntBASIC21.1■□□□□ 0.97
LRRC46Q96FV0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRRC46Q96FV0 AC142472.1-201ENST00000612013 1741 ntBASIC21.09■□□□□ 0.97
LRRC46Q96FV0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
LRRC46Q96FV0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LRRC46Q96FV0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC46Q96FV0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LRRC46Q96FV0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC46Q96FV0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC46Q96FV0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC46Q96FV0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC46Q96FV0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms