Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CCER1Q8TC90 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC35.33■■■■□ 3.25
CCER1Q8TC90 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CCER1Q8TC90 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC35.33■■■■□ 3.25
CCER1Q8TC90 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC35.33■■■■□ 3.25
CCER1Q8TC90 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CCER1Q8TC90 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
CCER1Q8TC90 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CCER1Q8TC90 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC35.31■■■■□ 3.24
CCER1Q8TC90 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
CCER1Q8TC90 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC35.31■■■■□ 3.24
CCER1Q8TC90 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
CCER1Q8TC90 EED-207ENST00000528180 1745 ntTSL 5 BASIC35.31■■■■□ 3.24
CCER1Q8TC90 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC35.31■■■■□ 3.24
CCER1Q8TC90 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC35.31■■■■□ 3.24
CCER1Q8TC90 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC35.3■■■■□ 3.24
CCER1Q8TC90 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC35.3■■■■□ 3.24
CCER1Q8TC90 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
CCER1Q8TC90 MIR7108-201ENST00000614319 87 ntBASIC35.3■■■■□ 3.24
CCER1Q8TC90 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC35.3■■■■□ 3.24
CCER1Q8TC90 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CCER1Q8TC90 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CCER1Q8TC90 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
CCER1Q8TC90 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC35.29■■■■□ 3.24
CCER1Q8TC90 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
CCER1Q8TC90 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CCER1Q8TC90 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC35.28■■■■□ 3.24
CCER1Q8TC90 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CCER1Q8TC90 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC35.27■■■■□ 3.24
CCER1Q8TC90 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CCER1Q8TC90 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CCER1Q8TC90 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CCER1Q8TC90 SMPD5-203ENST00000639008 1464 ntBASIC35.27■■■■□ 3.24
CCER1Q8TC90 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CCER1Q8TC90 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC35.26■■■■□ 3.24
CCER1Q8TC90 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC35.26■■■■□ 3.24
CCER1Q8TC90 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CCER1Q8TC90 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC35.26■■■■□ 3.24
CCER1Q8TC90 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CCER1Q8TC90 MIR3960-201ENST00000583311 91 ntBASIC35.26■■■■□ 3.24
CCER1Q8TC90 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC35.26■■■■□ 3.23
CCER1Q8TC90 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CCER1Q8TC90 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CCER1Q8TC90 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC35.25■■■■□ 3.23
CCER1Q8TC90 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
CCER1Q8TC90 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
CCER1Q8TC90 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CCER1Q8TC90 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC35.25■■■■□ 3.23
CCER1Q8TC90 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CCER1Q8TC90 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC35.23■■■■□ 3.23
CCER1Q8TC90 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC35.23■■■■□ 3.23
CCER1Q8TC90 AC092296.2-201ENST00000589470 999 ntBASIC35.23■■■■□ 3.23
CCER1Q8TC90 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC35.22■■■■□ 3.23
CCER1Q8TC90 RPS2-202ENST00000526522 924 ntTSL 2 BASIC35.22■■■■□ 3.23
CCER1Q8TC90 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC35.22■■■■□ 3.23
CCER1Q8TC90 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CCER1Q8TC90 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
CCER1Q8TC90 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CCER1Q8TC90 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC35.21■■■■□ 3.23
CCER1Q8TC90 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC35.21■■■■□ 3.23
CCER1Q8TC90 PVT1-219ENST00000523427 938 ntTSL 3 BASIC35.21■■■■□ 3.23
CCER1Q8TC90 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CCER1Q8TC90 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CCER1Q8TC90 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
CCER1Q8TC90 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC35.2■■■■□ 3.23
CCER1Q8TC90 TPT1-202ENST00000379055 948 ntTSL 2 BASIC35.2■■■■□ 3.23
CCER1Q8TC90 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC35.19■■■■□ 3.22
CCER1Q8TC90 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC35.19■■■■□ 3.22
CCER1Q8TC90 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC35.19■■■■□ 3.22
CCER1Q8TC90 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC35.19■■■■□ 3.22
CCER1Q8TC90 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CCER1Q8TC90 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC35.17■■■■□ 3.22
CCER1Q8TC90 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CCER1Q8TC90 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC35.17■■■■□ 3.22
CCER1Q8TC90 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC35.17■■■■□ 3.22
CCER1Q8TC90 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC35.17■■■■□ 3.22
CCER1Q8TC90 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC35.17■■■■□ 3.22
CCER1Q8TC90 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CCER1Q8TC90 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
CCER1Q8TC90 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC35.16■■■■□ 3.22
CCER1Q8TC90 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CCER1Q8TC90 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC35.16■■■■□ 3.22
CCER1Q8TC90 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CCER1Q8TC90 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
CCER1Q8TC90 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CCER1Q8TC90 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
CCER1Q8TC90 MIR639-201ENST00000384974 98 ntBASIC35.14■■■■□ 3.22
CCER1Q8TC90 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC35.14■■■■□ 3.22
CCER1Q8TC90 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC35.14■■■■□ 3.22
CCER1Q8TC90 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms