Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RNF149Q8NC42 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RNF149Q8NC42 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
RNF149Q8NC42 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
RNF149Q8NC42 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF149Q8NC42 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF149Q8NC42 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RNF149Q8NC42 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.2■■□□□ 1.79
RNF149Q8NC42 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.2■■□□□ 1.78
RNF149Q8NC42 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.2■■□□□ 1.78
RNF149Q8NC42 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
RNF149Q8NC42 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
RNF149Q8NC42 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RNF149Q8NC42 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.19■■□□□ 1.78
RNF149Q8NC42 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.18■■□□□ 1.78
RNF149Q8NC42 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RNF149Q8NC42 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.18■■□□□ 1.78
RNF149Q8NC42 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
RNF149Q8NC42 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
RNF149Q8NC42 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
RNF149Q8NC42 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.17■■□□□ 1.78
RNF149Q8NC42 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.16■■□□□ 1.78
RNF149Q8NC42 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF149Q8NC42 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF149Q8NC42 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.16■■□□□ 1.78
RNF149Q8NC42 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.16■■□□□ 1.78
RNF149Q8NC42 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF149Q8NC42 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF149Q8NC42 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
RNF149Q8NC42 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
RNF149Q8NC42 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
RNF149Q8NC42 AL592295.1-201ENST00000400984 884 ntBASIC26.15■■□□□ 1.78
RNF149Q8NC42 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.15■■□□□ 1.78
RNF149Q8NC42 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.15■■□□□ 1.78
RNF149Q8NC42 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.15■■□□□ 1.78
RNF149Q8NC42 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.15■■□□□ 1.78
RNF149Q8NC42 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
RNF149Q8NC42 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF149Q8NC42 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RNF149Q8NC42 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
RNF149Q8NC42 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.14■■□□□ 1.78
RNF149Q8NC42 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
RNF149Q8NC42 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF149Q8NC42 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF149Q8NC42 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RNF149Q8NC42 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.13■■□□□ 1.77
RNF149Q8NC42 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.13■■□□□ 1.77
RNF149Q8NC42 AC097639.1-201ENST00000565519 1891 ntBASIC26.13■■□□□ 1.77
RNF149Q8NC42 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.13■■□□□ 1.77
RNF149Q8NC42 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RNF149Q8NC42 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RNF149Q8NC42 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
RNF149Q8NC42 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF149Q8NC42 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF149Q8NC42 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF149Q8NC42 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.12■■□□□ 1.77
RNF149Q8NC42 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.12■■□□□ 1.77
RNF149Q8NC42 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RNF149Q8NC42 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF149Q8NC42 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.12■■□□□ 1.77
RNF149Q8NC42 KRT18P24-201ENST00000344739 1156 ntBASIC26.12■■□□□ 1.77
RNF149Q8NC42 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.12■■□□□ 1.77
RNF149Q8NC42 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF149Q8NC42 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF149Q8NC42 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RNF149Q8NC42 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.12■■□□□ 1.77
RNF149Q8NC42 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF149Q8NC42 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RNF149Q8NC42 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RNF149Q8NC42 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
RNF149Q8NC42 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RNF149Q8NC42 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RNF149Q8NC42 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF149Q8NC42 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RNF149Q8NC42 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF149Q8NC42 AC120024.1-201ENST00000562672 995 ntBASIC26.1■■□□□ 1.77
RNF149Q8NC42 THA1P-201ENST00000590384 1145 ntBASIC26.1■■□□□ 1.77
RNF149Q8NC42 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RNF149Q8NC42 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF149Q8NC42 RNF146-205ENST00000477776 762 ntTSL 3 BASIC26.09■■□□□ 1.77
RNF149Q8NC42 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.09■■□□□ 1.77
RNF149Q8NC42 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RNF149Q8NC42 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.08■■□□□ 1.77
RNF149Q8NC42 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
RNF149Q8NC42 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.08■■□□□ 1.77
RNF149Q8NC42 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
RNF149Q8NC42 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
RNF149Q8NC42 FOXO3B-201ENST00000395675 1928 ntBASIC26.08■■□□□ 1.76
RNF149Q8NC42 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF149Q8NC42 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF149Q8NC42 AC091060.1-201ENST00000623524 1766 ntBASIC26.07■■□□□ 1.76
RNF149Q8NC42 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RNF149Q8NC42 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RNF149Q8NC42 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
RNF149Q8NC42 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF149Q8NC42 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF149Q8NC42 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
RNF149Q8NC42 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.06■■□□□ 1.76
RNF149Q8NC42 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.06■■□□□ 1.76
RNF149Q8NC42 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms