Protein–RNA interactions for Protein: Q8NBI2

CYB561A3, Cytochrome b ascorbate-dependent protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3Q8NBI2 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 AP003733.4-201ENST00000623785 1697 ntBASIC21.3■■□□□ 1
CYB561A3Q8NBI2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CYB561A3Q8NBI2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
CYB561A3Q8NBI2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.28■■□□□ 1
CYB561A3Q8NBI2 SMPD5-203ENST00000639008 1464 ntBASIC21.27■■□□□ 1
CYB561A3Q8NBI2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CYB561A3Q8NBI2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.27■■□□□ 1
CYB561A3Q8NBI2 MIR3960-201ENST00000583311 91 ntBASIC21.27■■□□□ 1
CYB561A3Q8NBI2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYB561A3Q8NBI2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CYB561A3Q8NBI2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CYB561A3Q8NBI2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CYB561A3Q8NBI2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CYB561A3Q8NBI2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CYB561A3Q8NBI2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CYB561A3Q8NBI2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CYB561A3Q8NBI2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CYB561A3Q8NBI2 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CYB561A3Q8NBI2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CYB561A3Q8NBI2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.25■□□□□ 0.99
CYB561A3Q8NBI2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 AC092296.2-201ENST00000589470 999 ntBASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CYB561A3Q8NBI2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CYB561A3Q8NBI2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CYB561A3Q8NBI2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.22■□□□□ 0.99
CYB561A3Q8NBI2 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CYB561A3Q8NBI2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CYB561A3Q8NBI2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.22■□□□□ 0.99
CYB561A3Q8NBI2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CYB561A3Q8NBI2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.22■□□□□ 0.99
CYB561A3Q8NBI2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 MIR639-201ENST00000384974 98 ntBASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CYB561A3Q8NBI2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CYB561A3Q8NBI2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYB561A3Q8NBI2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CYB561A3Q8NBI2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CYB561A3Q8NBI2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms