Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
EXD3Q8N9H8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
EXD3Q8N9H8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
EXD3Q8N9H8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
EXD3Q8N9H8 AL136116.3-201ENST00000402907 1138 ntBASIC22.4■■□□□ 1.18
EXD3Q8N9H8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.4■■□□□ 1.18
EXD3Q8N9H8 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.4■■□□□ 1.18
EXD3Q8N9H8 AC005837.3-201ENST00000612163 286 ntBASIC22.4■■□□□ 1.18
EXD3Q8N9H8 AC110285.6-201ENST00000617652 491 ntBASIC22.4■■□□□ 1.18
EXD3Q8N9H8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
EXD3Q8N9H8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
EXD3Q8N9H8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
EXD3Q8N9H8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
EXD3Q8N9H8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
EXD3Q8N9H8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EXD3Q8N9H8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.39■■□□□ 1.17
EXD3Q8N9H8 AC022616.5-201ENST00000518796 181 ntBASIC22.39■■□□□ 1.17
EXD3Q8N9H8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.39■■□□□ 1.17
EXD3Q8N9H8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
EXD3Q8N9H8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
EXD3Q8N9H8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 KRT18P24-201ENST00000344739 1156 ntBASIC22.38■■□□□ 1.17
EXD3Q8N9H8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 AC137630.3-201ENST00000607245 391 ntBASIC22.38■■□□□ 1.17
EXD3Q8N9H8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
EXD3Q8N9H8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.37■■□□□ 1.17
EXD3Q8N9H8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.37■■□□□ 1.17
EXD3Q8N9H8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
EXD3Q8N9H8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.37■■□□□ 1.17
EXD3Q8N9H8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
EXD3Q8N9H8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
EXD3Q8N9H8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.37■■□□□ 1.17
EXD3Q8N9H8 AC021242.3-201ENST00000607598 1377 ntBASIC22.37■■□□□ 1.17
EXD3Q8N9H8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EXD3Q8N9H8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
EXD3Q8N9H8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 AC092666.2-201ENST00000613287 246 ntBASIC22.35■■□□□ 1.17
EXD3Q8N9H8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
EXD3Q8N9H8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.34■■□□□ 1.17
EXD3Q8N9H8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
EXD3Q8N9H8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.33■■□□□ 1.17
EXD3Q8N9H8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.33■■□□□ 1.16
EXD3Q8N9H8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
EXD3Q8N9H8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
EXD3Q8N9H8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
EXD3Q8N9H8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
EXD3Q8N9H8 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
EXD3Q8N9H8 AC092028.1-203ENST00000608262 953 ntBASIC22.32■■□□□ 1.16
EXD3Q8N9H8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.32■■□□□ 1.16
EXD3Q8N9H8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.31■■□□□ 1.16
EXD3Q8N9H8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
EXD3Q8N9H8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.31■■□□□ 1.16
EXD3Q8N9H8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.31■■□□□ 1.16
EXD3Q8N9H8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.31■■□□□ 1.16
EXD3Q8N9H8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
EXD3Q8N9H8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
EXD3Q8N9H8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 AC096631.2-201ENST00000436136 790 ntBASIC22.3■■□□□ 1.16
EXD3Q8N9H8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 WHAMMP3-201ENST00000611636 1609 ntBASIC22.3■■□□□ 1.16
EXD3Q8N9H8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.3■■□□□ 1.16
EXD3Q8N9H8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
EXD3Q8N9H8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.29■■□□□ 1.16
EXD3Q8N9H8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.29■■□□□ 1.16
EXD3Q8N9H8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.29■■□□□ 1.16
EXD3Q8N9H8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms