Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ARHGEF39Q8N4T4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
ARHGEF39Q8N4T4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.58■■□□□ 1.2
ARHGEF39Q8N4T4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
ARHGEF39Q8N4T4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ARHGEF39Q8N4T4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.57■■□□□ 1.2
ARHGEF39Q8N4T4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ARHGEF39Q8N4T4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
ARHGEF39Q8N4T4 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
ARHGEF39Q8N4T4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.57■■□□□ 1.2
ARHGEF39Q8N4T4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ARHGEF39Q8N4T4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ARHGEF39Q8N4T4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ARHGEF39Q8N4T4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.56■■□□□ 1.2
ARHGEF39Q8N4T4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.56■■□□□ 1.2
ARHGEF39Q8N4T4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ARHGEF39Q8N4T4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ARHGEF39Q8N4T4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
ARHGEF39Q8N4T4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
ARHGEF39Q8N4T4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ARHGEF39Q8N4T4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
ARHGEF39Q8N4T4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.53■■□□□ 1.2
ARHGEF39Q8N4T4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ARHGEF39Q8N4T4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.53■■□□□ 1.2
ARHGEF39Q8N4T4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.53■■□□□ 1.2
ARHGEF39Q8N4T4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
ARHGEF39Q8N4T4 KRT8P33-201ENST00000508125 1423 ntBASIC22.53■■□□□ 1.2
ARHGEF39Q8N4T4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ARHGEF39Q8N4T4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.52■■□□□ 1.2
ARHGEF39Q8N4T4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
ARHGEF39Q8N4T4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ARHGEF39Q8N4T4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
ARHGEF39Q8N4T4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
ARHGEF39Q8N4T4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ARHGEF39Q8N4T4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
ARHGEF39Q8N4T4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.51■■□□□ 1.19
ARHGEF39Q8N4T4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
ARHGEF39Q8N4T4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
ARHGEF39Q8N4T4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.51■■□□□ 1.19
ARHGEF39Q8N4T4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 AC022616.5-201ENST00000518796 181 ntBASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 AC103724.3-201ENST00000564481 992 ntBASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ARHGEF39Q8N4T4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ARHGEF39Q8N4T4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ARHGEF39Q8N4T4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ARHGEF39Q8N4T4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ARHGEF39Q8N4T4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
ARHGEF39Q8N4T4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.49■■□□□ 1.19
ARHGEF39Q8N4T4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.48■■□□□ 1.19
ARHGEF39Q8N4T4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARHGEF39Q8N4T4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.48■■□□□ 1.19
ARHGEF39Q8N4T4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.48■■□□□ 1.19
ARHGEF39Q8N4T4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARHGEF39Q8N4T4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.48■■□□□ 1.19
ARHGEF39Q8N4T4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARHGEF39Q8N4T4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ARHGEF39Q8N4T4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 YBX1P4-201ENST00000392794 808 ntBASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.47■■□□□ 1.19
ARHGEF39Q8N4T4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
ARHGEF39Q8N4T4 AL592295.1-201ENST00000400984 884 ntBASIC22.46■■□□□ 1.19
ARHGEF39Q8N4T4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.46■■□□□ 1.19
ARHGEF39Q8N4T4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
ARHGEF39Q8N4T4 FOXO3B-201ENST00000395675 1928 ntBASIC22.46■■□□□ 1.19
ARHGEF39Q8N4T4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.46■■□□□ 1.19
ARHGEF39Q8N4T4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ARHGEF39Q8N4T4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ARHGEF39Q8N4T4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
ARHGEF39Q8N4T4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
ARHGEF39Q8N4T4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
ARHGEF39Q8N4T4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ARHGEF39Q8N4T4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms