Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
VPS52Q8N1B4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
VPS52Q8N1B4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
VPS52Q8N1B4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.7■■□□□ 1.71
VPS52Q8N1B4 KRT18P24-201ENST00000344739 1156 ntBASIC25.7■■□□□ 1.7
VPS52Q8N1B4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS52Q8N1B4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
VPS52Q8N1B4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
VPS52Q8N1B4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
VPS52Q8N1B4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
VPS52Q8N1B4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
VPS52Q8N1B4 AC142472.1-201ENST00000612013 1741 ntBASIC25.68■■□□□ 1.7
VPS52Q8N1B4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.68■■□□□ 1.7
VPS52Q8N1B4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS52Q8N1B4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS52Q8N1B4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS52Q8N1B4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS52Q8N1B4 AC135731.1-201ENST00000569415 2548 ntBASIC25.68■■□□□ 1.7
VPS52Q8N1B4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.68■■□□□ 1.7
VPS52Q8N1B4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
VPS52Q8N1B4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
VPS52Q8N1B4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS52Q8N1B4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS52Q8N1B4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.67■■□□□ 1.7
VPS52Q8N1B4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.67■■□□□ 1.7
VPS52Q8N1B4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS52Q8N1B4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.67■■□□□ 1.7
VPS52Q8N1B4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
VPS52Q8N1B4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.66■■□□□ 1.7
VPS52Q8N1B4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.66■■□□□ 1.7
VPS52Q8N1B4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.66■■□□□ 1.7
VPS52Q8N1B4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
VPS52Q8N1B4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS52Q8N1B4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS52Q8N1B4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.65■■□□□ 1.7
VPS52Q8N1B4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.65■■□□□ 1.7
VPS52Q8N1B4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VPS52Q8N1B4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.7
VPS52Q8N1B4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
VPS52Q8N1B4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.64■■□□□ 1.7
VPS52Q8N1B4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.64■■□□□ 1.7
VPS52Q8N1B4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
VPS52Q8N1B4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.63■■□□□ 1.69
VPS52Q8N1B4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.63■■□□□ 1.69
VPS52Q8N1B4 AC008406.3-201ENST00000620001 1374 ntBASIC25.63■■□□□ 1.69
VPS52Q8N1B4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS52Q8N1B4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VPS52Q8N1B4 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS52Q8N1B4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VPS52Q8N1B4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 UNC93B8-201ENST00000511903 705 ntBASIC25.62■■□□□ 1.69
VPS52Q8N1B4 AC120024.1-201ENST00000562672 995 ntBASIC25.62■■□□□ 1.69
VPS52Q8N1B4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.62■■□□□ 1.69
VPS52Q8N1B4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS52Q8N1B4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS52Q8N1B4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VPS52Q8N1B4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
VPS52Q8N1B4 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 AC137630.3-201ENST00000607245 391 ntBASIC25.6■■□□□ 1.69
VPS52Q8N1B4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 AP004609.3-201ENST00000610705 1884 ntBASIC25.6■■□□□ 1.69
VPS52Q8N1B4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VPS52Q8N1B4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
VPS52Q8N1B4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.59■■□□□ 1.69
VPS52Q8N1B4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
VPS52Q8N1B4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
VPS52Q8N1B4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
VPS52Q8N1B4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
VPS52Q8N1B4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.59■■□□□ 1.69
VPS52Q8N1B4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.58■■□□□ 1.69
VPS52Q8N1B4 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VPS52Q8N1B4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VPS52Q8N1B4 KRT16P3-201ENST00000439127 1283 ntBASIC25.58■■□□□ 1.69
VPS52Q8N1B4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.58■■□□□ 1.69
VPS52Q8N1B4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.58■■□□□ 1.69
VPS52Q8N1B4 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VPS52Q8N1B4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.57■■□□□ 1.68
VPS52Q8N1B4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
VPS52Q8N1B4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.57■■□□□ 1.68
VPS52Q8N1B4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS52Q8N1B4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS52Q8N1B4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
VPS52Q8N1B4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms