Protein–RNA interactions for Protein: Q8N123

CPXCR1, CPX chromosomal region candidate gene 1 protein, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPXCR1Q8N123 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CPXCR1Q8N123 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.98
CPXCR1Q8N123 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.98
CPXCR1Q8N123 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CPXCR1Q8N123 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CPXCR1Q8N123 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CPXCR1Q8N123 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.44■■□□□ 1.98
CPXCR1Q8N123 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.44■■□□□ 1.98
CPXCR1Q8N123 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CPXCR1Q8N123 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.43■■□□□ 1.98
CPXCR1Q8N123 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CPXCR1Q8N123 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CPXCR1Q8N123 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CPXCR1Q8N123 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
CPXCR1Q8N123 AC137630.3-201ENST00000607245 391 ntBASIC27.42■■□□□ 1.98
CPXCR1Q8N123 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC27.42■■□□□ 1.98
CPXCR1Q8N123 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
CPXCR1Q8N123 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CPXCR1Q8N123 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
CPXCR1Q8N123 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPXCR1Q8N123 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPXCR1Q8N123 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPXCR1Q8N123 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.41■■□□□ 1.98
CPXCR1Q8N123 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.41■■□□□ 1.98
CPXCR1Q8N123 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
CPXCR1Q8N123 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
CPXCR1Q8N123 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
CPXCR1Q8N123 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
CPXCR1Q8N123 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
CPXCR1Q8N123 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
CPXCR1Q8N123 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.4■■□□□ 1.98
CPXCR1Q8N123 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
CPXCR1Q8N123 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CPXCR1Q8N123 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CPXCR1Q8N123 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.39■■□□□ 1.98
CPXCR1Q8N123 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CPXCR1Q8N123 UNC93B8-201ENST00000511903 705 ntBASIC27.39■■□□□ 1.98
CPXCR1Q8N123 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
CPXCR1Q8N123 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CPXCR1Q8N123 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.39■■□□□ 1.97
CPXCR1Q8N123 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.38■■□□□ 1.97
CPXCR1Q8N123 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CPXCR1Q8N123 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CPXCR1Q8N123 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPXCR1Q8N123 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPXCR1Q8N123 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CPXCR1Q8N123 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.38■■□□□ 1.97
CPXCR1Q8N123 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CPXCR1Q8N123 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CPXCR1Q8N123 TSPY9P-201ENST00000440215 945 ntBASIC27.37■■□□□ 1.97
CPXCR1Q8N123 TSPY11P-201ENST00000442607 1045 ntBASIC27.37■■□□□ 1.97
CPXCR1Q8N123 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC27.37■■□□□ 1.97
CPXCR1Q8N123 MIR4281-201ENST00000580852 62 ntBASIC27.37■■□□□ 1.97
CPXCR1Q8N123 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CPXCR1Q8N123 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CPXCR1Q8N123 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPXCR1Q8N123 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPXCR1Q8N123 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC27.36■■□□□ 1.97
CPXCR1Q8N123 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.36■■□□□ 1.97
CPXCR1Q8N123 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.36■■□□□ 1.97
CPXCR1Q8N123 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CPXCR1Q8N123 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CPXCR1Q8N123 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
CPXCR1Q8N123 AC021242.3-201ENST00000607598 1377 ntBASIC27.35■■□□□ 1.97
CPXCR1Q8N123 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC27.35■■□□□ 1.97
CPXCR1Q8N123 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CPXCR1Q8N123 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CPXCR1Q8N123 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CPXCR1Q8N123 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.34■■□□□ 1.97
CPXCR1Q8N123 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27.34■■□□□ 1.97
CPXCR1Q8N123 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.34■■□□□ 1.97
CPXCR1Q8N123 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CPXCR1Q8N123 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CPXCR1Q8N123 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
CPXCR1Q8N123 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CPXCR1Q8N123 ERN1-208ENST00000606895 2068 ntBASIC27.33■■□□□ 1.97
CPXCR1Q8N123 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
CPXCR1Q8N123 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CPXCR1Q8N123 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.33■■□□□ 1.97
CPXCR1Q8N123 KRT16P3-201ENST00000439127 1283 ntBASIC27.33■■□□□ 1.97
CPXCR1Q8N123 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CPXCR1Q8N123 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CPXCR1Q8N123 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC27.32■■□□□ 1.96
CPXCR1Q8N123 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.32■■□□□ 1.96
CPXCR1Q8N123 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.32■■□□□ 1.96
CPXCR1Q8N123 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CPXCR1Q8N123 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.31■■□□□ 1.96
CPXCR1Q8N123 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.31■■□□□ 1.96
CPXCR1Q8N123 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CPXCR1Q8N123 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.3■■□□□ 1.96
CPXCR1Q8N123 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.3■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms