Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AC009831.1-201ENST00000580420 1582 ntBASIC23.27■■□□□ 1.32
APLFQ8IW19 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
APLFQ8IW19 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
APLFQ8IW19 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.27■■□□□ 1.32
APLFQ8IW19 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
APLFQ8IW19 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
APLFQ8IW19 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.27■■□□□ 1.32
APLFQ8IW19 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.27■■□□□ 1.32
APLFQ8IW19 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
APLFQ8IW19 AC092803.2-201ENST00000564287 1899 ntBASIC23.26■■□□□ 1.31
APLFQ8IW19 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.26■■□□□ 1.31
APLFQ8IW19 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
APLFQ8IW19 AL592293.1-201ENST00000502889 1188 ntBASIC23.26■■□□□ 1.31
APLFQ8IW19 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
APLFQ8IW19 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
APLFQ8IW19 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
APLFQ8IW19 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
APLFQ8IW19 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
APLFQ8IW19 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
APLFQ8IW19 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.25■■□□□ 1.31
APLFQ8IW19 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
APLFQ8IW19 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
APLFQ8IW19 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
APLFQ8IW19 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
APLFQ8IW19 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.24■■□□□ 1.31
APLFQ8IW19 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.24■■□□□ 1.31
APLFQ8IW19 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
APLFQ8IW19 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.24■■□□□ 1.31
APLFQ8IW19 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
APLFQ8IW19 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
APLFQ8IW19 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
APLFQ8IW19 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
APLFQ8IW19 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
APLFQ8IW19 AP002414.2-202ENST00000590929 1450 ntBASIC23.24■■□□□ 1.31
APLFQ8IW19 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
APLFQ8IW19 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
APLFQ8IW19 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
APLFQ8IW19 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.23■■□□□ 1.31
APLFQ8IW19 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.23■■□□□ 1.31
APLFQ8IW19 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
APLFQ8IW19 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
APLFQ8IW19 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.23■■□□□ 1.31
APLFQ8IW19 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.23■■□□□ 1.31
APLFQ8IW19 AL359258.2-201ENST00000564063 1566 ntBASIC23.23■■□□□ 1.31
APLFQ8IW19 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
APLFQ8IW19 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
APLFQ8IW19 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
APLFQ8IW19 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.22■■□□□ 1.31
APLFQ8IW19 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
APLFQ8IW19 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.22■■□□□ 1.31
APLFQ8IW19 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.21■■□□□ 1.31
APLFQ8IW19 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
APLFQ8IW19 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
APLFQ8IW19 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.21■■□□□ 1.31
APLFQ8IW19 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.21■■□□□ 1.31
APLFQ8IW19 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
APLFQ8IW19 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
APLFQ8IW19 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
APLFQ8IW19 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.21■■□□□ 1.31
APLFQ8IW19 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
APLFQ8IW19 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.2■■□□□ 1.3
APLFQ8IW19 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
APLFQ8IW19 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
APLFQ8IW19 AC025884.2-201ENST00000553429 711 ntBASIC23.2■■□□□ 1.3
APLFQ8IW19 AC026202.3-201ENST00000600805 1127 ntBASIC23.2■■□□□ 1.3
APLFQ8IW19 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
APLFQ8IW19 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 DUX4L18-201ENST00000553347 1267 ntBASIC23.19■■□□□ 1.3
APLFQ8IW19 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
APLFQ8IW19 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.19■■□□□ 1.3
APLFQ8IW19 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
APLFQ8IW19 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
APLFQ8IW19 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.18■■□□□ 1.3
APLFQ8IW19 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
APLFQ8IW19 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
APLFQ8IW19 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
APLFQ8IW19 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
APLFQ8IW19 AC142381.3-201ENST00000568208 1670 ntBASIC23.18■■□□□ 1.3
APLFQ8IW19 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
APLFQ8IW19 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
APLFQ8IW19 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.17■■□□□ 1.3
APLFQ8IW19 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
APLFQ8IW19 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.17■■□□□ 1.3
APLFQ8IW19 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
APLFQ8IW19 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
APLFQ8IW19 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
APLFQ8IW19 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
APLFQ8IW19 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
APLFQ8IW19 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms