Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
USP48Q86UV5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
USP48Q86UV5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC29.13■■■□□ 2.25
USP48Q86UV5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
USP48Q86UV5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
USP48Q86UV5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.13■■■□□ 2.25
USP48Q86UV5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC29.13■■■□□ 2.25
USP48Q86UV5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
USP48Q86UV5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.13■■■□□ 2.25
USP48Q86UV5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
USP48Q86UV5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
USP48Q86UV5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
USP48Q86UV5 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
USP48Q86UV5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.12■■■□□ 2.25
USP48Q86UV5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.12■■■□□ 2.25
USP48Q86UV5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
USP48Q86UV5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC29.12■■■□□ 2.25
USP48Q86UV5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
USP48Q86UV5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC29.12■■■□□ 2.25
USP48Q86UV5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
USP48Q86UV5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
USP48Q86UV5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
USP48Q86UV5 TSPY9P-201ENST00000440215 945 ntBASIC29.1■■■□□ 2.25
USP48Q86UV5 TSPY11P-201ENST00000442607 1045 ntBASIC29.1■■■□□ 2.25
USP48Q86UV5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
USP48Q86UV5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
USP48Q86UV5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
USP48Q86UV5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
USP48Q86UV5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC29.09■■■□□ 2.25
USP48Q86UV5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29.09■■■□□ 2.25
USP48Q86UV5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
USP48Q86UV5 AC091060.1-201ENST00000623524 1766 ntBASIC29.08■■■□□ 2.25
USP48Q86UV5 WHAMMP3-201ENST00000611636 1609 ntBASIC29.08■■■□□ 2.25
USP48Q86UV5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
USP48Q86UV5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC29.07■■■□□ 2.24
USP48Q86UV5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
USP48Q86UV5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC29.07■■■□□ 2.24
USP48Q86UV5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
USP48Q86UV5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
USP48Q86UV5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.07■■■□□ 2.24
USP48Q86UV5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.07■■■□□ 2.24
USP48Q86UV5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
USP48Q86UV5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
USP48Q86UV5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
USP48Q86UV5 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
USP48Q86UV5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC29.06■■■□□ 2.24
USP48Q86UV5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.06■■■□□ 2.24
USP48Q86UV5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC29.06■■■□□ 2.24
USP48Q86UV5 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC29.05■■■□□ 2.24
USP48Q86UV5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
USP48Q86UV5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
USP48Q86UV5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.05■■■□□ 2.24
USP48Q86UV5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
USP48Q86UV5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
USP48Q86UV5 AC022616.5-201ENST00000518796 181 ntBASIC29.04■■■□□ 2.24
USP48Q86UV5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
USP48Q86UV5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
USP48Q86UV5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC29.04■■■□□ 2.24
USP48Q86UV5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
USP48Q86UV5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.03■■■□□ 2.24
USP48Q86UV5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
USP48Q86UV5 KRT18P24-201ENST00000344739 1156 ntBASIC29.03■■■□□ 2.24
USP48Q86UV5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC29.03■■■□□ 2.24
USP48Q86UV5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
USP48Q86UV5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
USP48Q86UV5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
USP48Q86UV5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
USP48Q86UV5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
USP48Q86UV5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
USP48Q86UV5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.02■■■□□ 2.24
USP48Q86UV5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC29.02■■■□□ 2.24
USP48Q86UV5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.02■■■□□ 2.24
USP48Q86UV5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
USP48Q86UV5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
USP48Q86UV5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.01■■■□□ 2.24
USP48Q86UV5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
USP48Q86UV5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.01■■■□□ 2.23
USP48Q86UV5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.01■■■□□ 2.23
USP48Q86UV5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.01■■■□□ 2.23
USP48Q86UV5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.01■■■□□ 2.23
USP48Q86UV5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
USP48Q86UV5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
USP48Q86UV5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.01■■■□□ 2.23
USP48Q86UV5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
USP48Q86UV5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC29■■■□□ 2.23
USP48Q86UV5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC29■■■□□ 2.23
USP48Q86UV5 AC131281.2-201ENST00000520478 145 ntBASIC29■■■□□ 2.23
USP48Q86UV5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29■■■□□ 2.23
USP48Q86UV5 AC137630.3-201ENST00000607245 391 ntBASIC29■■■□□ 2.23
USP48Q86UV5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC29■■■□□ 2.23
USP48Q86UV5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
USP48Q86UV5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
USP48Q86UV5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
USP48Q86UV5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
USP48Q86UV5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
USP48Q86UV5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.98■■■□□ 2.23
USP48Q86UV5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.98■■■□□ 2.23
USP48Q86UV5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.98■■■□□ 2.23
USP48Q86UV5 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.98■■■□□ 2.23
USP48Q86UV5 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.98■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms