Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
C9orf139Q6ZV77 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf139Q6ZV77 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf139Q6ZV77 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
C9orf139Q6ZV77 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.24■□□□□ 0.67
C9orf139Q6ZV77 AC011551.1-201ENST00000614101 683 ntBASIC19.24■□□□□ 0.67
C9orf139Q6ZV77 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.24■□□□□ 0.67
C9orf139Q6ZV77 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
C9orf139Q6ZV77 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf139Q6ZV77 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.22■□□□□ 0.67
C9orf139Q6ZV77 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf139Q6ZV77 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
C9orf139Q6ZV77 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf139Q6ZV77 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf139Q6ZV77 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf139Q6ZV77 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
C9orf139Q6ZV77 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.21■□□□□ 0.67
C9orf139Q6ZV77 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.21■□□□□ 0.67
C9orf139Q6ZV77 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.21■□□□□ 0.67
C9orf139Q6ZV77 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.21■□□□□ 0.67
C9orf139Q6ZV77 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 MIR4281-201ENST00000580852 62 ntBASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
C9orf139Q6ZV77 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf139Q6ZV77 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
C9orf139Q6ZV77 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf139Q6ZV77 UNC93B8-201ENST00000511903 705 ntBASIC19.19■□□□□ 0.66
C9orf139Q6ZV77 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
C9orf139Q6ZV77 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf139Q6ZV77 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf139Q6ZV77 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
C9orf139Q6ZV77 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf139Q6ZV77 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
C9orf139Q6ZV77 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
C9orf139Q6ZV77 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.18■□□□□ 0.66
C9orf139Q6ZV77 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.18■□□□□ 0.66
C9orf139Q6ZV77 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 KRT16P3-201ENST00000439127 1283 ntBASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
C9orf139Q6ZV77 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 AL121749.1-202ENST00000609313 2153 ntBASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
C9orf139Q6ZV77 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 AC092028.1-203ENST00000608262 953 ntBASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
C9orf139Q6ZV77 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
C9orf139Q6ZV77 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.14■□□□□ 0.65
C9orf139Q6ZV77 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
C9orf139Q6ZV77 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.13■□□□□ 0.65
C9orf139Q6ZV77 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
C9orf139Q6ZV77 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.13■□□□□ 0.65
C9orf139Q6ZV77 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms