Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
C11orf88Q6PI97 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 AC142472.1-201ENST00000612013 1741 ntBASIC20.41■□□□□ 0.86
C11orf88Q6PI97 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
C11orf88Q6PI97 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
C11orf88Q6PI97 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.39■□□□□ 0.86
C11orf88Q6PI97 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
C11orf88Q6PI97 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
C11orf88Q6PI97 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.39■□□□□ 0.86
C11orf88Q6PI97 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
C11orf88Q6PI97 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
C11orf88Q6PI97 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C11orf88Q6PI97 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.39■□□□□ 0.85
C11orf88Q6PI97 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
C11orf88Q6PI97 AC138932.3-201ENST00000567634 1902 ntBASIC20.39■□□□□ 0.85
C11orf88Q6PI97 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
C11orf88Q6PI97 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
C11orf88Q6PI97 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
C11orf88Q6PI97 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
C11orf88Q6PI97 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.38■□□□□ 0.85
C11orf88Q6PI97 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.38■□□□□ 0.85
C11orf88Q6PI97 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C11orf88Q6PI97 AC022211.4-201ENST00000625094 2161 ntBASIC20.38■□□□□ 0.85
C11orf88Q6PI97 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
C11orf88Q6PI97 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
C11orf88Q6PI97 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
C11orf88Q6PI97 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C11orf88Q6PI97 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
C11orf88Q6PI97 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
C11orf88Q6PI97 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
C11orf88Q6PI97 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
C11orf88Q6PI97 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C11orf88Q6PI97 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
C11orf88Q6PI97 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
C11orf88Q6PI97 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C11orf88Q6PI97 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C11orf88Q6PI97 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
C11orf88Q6PI97 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.34■□□□□ 0.85
C11orf88Q6PI97 AC008813.1-201ENST00000536597 885 ntBASIC20.34■□□□□ 0.85
C11orf88Q6PI97 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.34■□□□□ 0.85
C11orf88Q6PI97 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
C11orf88Q6PI97 AC010501.1-201ENST00000606270 1962 ntBASIC20.34■□□□□ 0.85
C11orf88Q6PI97 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
C11orf88Q6PI97 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C11orf88Q6PI97 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
C11orf88Q6PI97 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
C11orf88Q6PI97 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
C11orf88Q6PI97 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.33■□□□□ 0.85
C11orf88Q6PI97 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.33■□□□□ 0.85
C11orf88Q6PI97 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.33■□□□□ 0.85
C11orf88Q6PI97 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
C11orf88Q6PI97 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
C11orf88Q6PI97 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
C11orf88Q6PI97 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
C11orf88Q6PI97 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
C11orf88Q6PI97 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C11orf88Q6PI97 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C11orf88Q6PI97 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C11orf88Q6PI97 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C11orf88Q6PI97 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
C11orf88Q6PI97 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
C11orf88Q6PI97 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C11orf88Q6PI97 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C11orf88Q6PI97 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
C11orf88Q6PI97 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.31■□□□□ 0.84
C11orf88Q6PI97 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms