Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.75■■□□□ 1.23
NIPAL1Q6NVV3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 SPCS2P3-201ENST00000500401 656 ntBASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
NIPAL1Q6NVV3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 AC010501.1-201ENST00000606270 1962 ntBASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 AC074183.2-201ENST00000623112 922 ntBASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.73■■□□□ 1.23
NIPAL1Q6NVV3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.72■■□□□ 1.23
NIPAL1Q6NVV3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.72■■□□□ 1.23
NIPAL1Q6NVV3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
NIPAL1Q6NVV3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.72■■□□□ 1.23
NIPAL1Q6NVV3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NIPAL1Q6NVV3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NIPAL1Q6NVV3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.71■■□□□ 1.23
NIPAL1Q6NVV3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NIPAL1Q6NVV3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NIPAL1Q6NVV3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NIPAL1Q6NVV3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NIPAL1Q6NVV3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
NIPAL1Q6NVV3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.71■■□□□ 1.23
NIPAL1Q6NVV3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NIPAL1Q6NVV3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.7■■□□□ 1.22
NIPAL1Q6NVV3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
NIPAL1Q6NVV3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.7■■□□□ 1.22
NIPAL1Q6NVV3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NIPAL1Q6NVV3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.7■■□□□ 1.22
NIPAL1Q6NVV3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NIPAL1Q6NVV3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NIPAL1Q6NVV3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
NIPAL1Q6NVV3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
NIPAL1Q6NVV3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.69■■□□□ 1.22
NIPAL1Q6NVV3 RPS2P7-201ENST00000447334 885 ntBASIC22.69■■□□□ 1.22
NIPAL1Q6NVV3 AC087393.1-201ENST00000582896 145 ntBASIC22.69■■□□□ 1.22
NIPAL1Q6NVV3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 AC139795.1-202ENST00000500444 432 ntBASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 DUSP8P4-201ENST00000399538 1761 ntBASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 AC091060.1-201ENST00000623524 1766 ntBASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NIPAL1Q6NVV3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NIPAL1Q6NVV3 AC145676.1-201ENST00000514988 2004 ntBASIC22.67■■□□□ 1.22
NIPAL1Q6NVV3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
NIPAL1Q6NVV3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NIPAL1Q6NVV3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NIPAL1Q6NVV3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NIPAL1Q6NVV3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
NIPAL1Q6NVV3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NIPAL1Q6NVV3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NIPAL1Q6NVV3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 DUX4L18-201ENST00000553347 1267 ntBASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 AL033527.3-201ENST00000566366 1196 ntBASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.65■■□□□ 1.22
NIPAL1Q6NVV3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
NIPAL1Q6NVV3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.64■■□□□ 1.22
NIPAL1Q6NVV3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
NIPAL1Q6NVV3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NIPAL1Q6NVV3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.64■■□□□ 1.21
NIPAL1Q6NVV3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.64■■□□□ 1.21
NIPAL1Q6NVV3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms