Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
CDCA8Q53HL2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC33.02■■■□□ 2.88
CDCA8Q53HL2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC33.02■■■□□ 2.88
CDCA8Q53HL2 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
CDCA8Q53HL2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC33.01■■■□□ 2.88
CDCA8Q53HL2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
CDCA8Q53HL2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
CDCA8Q53HL2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
CDCA8Q53HL2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC33.01■■■□□ 2.87
CDCA8Q53HL2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
CDCA8Q53HL2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC33.01■■■□□ 2.87
CDCA8Q53HL2 AC145676.1-201ENST00000514988 2004 ntBASIC33.01■■■□□ 2.87
CDCA8Q53HL2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC33■■■□□ 2.87
CDCA8Q53HL2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC33■■■□□ 2.87
CDCA8Q53HL2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDCA8Q53HL2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
CDCA8Q53HL2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CDCA8Q53HL2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CDCA8Q53HL2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDCA8Q53HL2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
CDCA8Q53HL2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC32.98■■■□□ 2.87
CDCA8Q53HL2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CDCA8Q53HL2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
CDCA8Q53HL2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC32.98■■■□□ 2.87
CDCA8Q53HL2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
CDCA8Q53HL2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC32.97■■■□□ 2.87
CDCA8Q53HL2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC32.97■■■□□ 2.87
CDCA8Q53HL2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC32.97■■■□□ 2.87
CDCA8Q53HL2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
CDCA8Q53HL2 AL031848.2-201ENST00000607670 837 ntBASIC32.97■■■□□ 2.87
CDCA8Q53HL2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.97■■■□□ 2.87
CDCA8Q53HL2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDCA8Q53HL2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
CDCA8Q53HL2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.96■■■□□ 2.87
CDCA8Q53HL2 AL451085.2-201ENST00000605085 799 ntBASIC32.96■■■□□ 2.87
CDCA8Q53HL2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC32.96■■■□□ 2.87
CDCA8Q53HL2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC32.96■■■□□ 2.87
CDCA8Q53HL2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CDCA8Q53HL2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC32.95■■■□□ 2.87
CDCA8Q53HL2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
CDCA8Q53HL2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.86
CDCA8Q53HL2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC32.94■■■□□ 2.86
CDCA8Q53HL2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC32.94■■■□□ 2.86
CDCA8Q53HL2 KRT18P24-201ENST00000344739 1156 ntBASIC32.94■■■□□ 2.86
CDCA8Q53HL2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC32.93■■■□□ 2.86
CDCA8Q53HL2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDCA8Q53HL2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC32.92■■■□□ 2.86
CDCA8Q53HL2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CDCA8Q53HL2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
CDCA8Q53HL2 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.92■■■□□ 2.86
CDCA8Q53HL2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC32.92■■■□□ 2.86
CDCA8Q53HL2 FOXO3B-201ENST00000395675 1928 ntBASIC32.91■■■□□ 2.86
CDCA8Q53HL2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC32.91■■■□□ 2.86
CDCA8Q53HL2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
CDCA8Q53HL2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
CDCA8Q53HL2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC32.91■■■□□ 2.86
CDCA8Q53HL2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CDCA8Q53HL2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CDCA8Q53HL2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDCA8Q53HL2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
CDCA8Q53HL2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDCA8Q53HL2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC32.89■■■□□ 2.86
CDCA8Q53HL2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.89■■■□□ 2.86
CDCA8Q53HL2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC32.89■■■□□ 2.86
CDCA8Q53HL2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC32.88■■■□□ 2.85
CDCA8Q53HL2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
CDCA8Q53HL2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC32.88■■■□□ 2.85
CDCA8Q53HL2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC32.88■■■□□ 2.85
CDCA8Q53HL2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CDCA8Q53HL2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
CDCA8Q53HL2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC32.87■■■□□ 2.85
CDCA8Q53HL2 AL035685.1-201ENST00000636663 812 ntBASIC32.87■■■□□ 2.85
CDCA8Q53HL2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CDCA8Q53HL2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
CDCA8Q53HL2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
CDCA8Q53HL2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC32.86■■■□□ 2.85
CDCA8Q53HL2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC32.86■■■□□ 2.85
CDCA8Q53HL2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC32.86■■■□□ 2.85
CDCA8Q53HL2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDCA8Q53HL2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDCA8Q53HL2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDCA8Q53HL2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDCA8Q53HL2 AC009299.2-201ENST00000482477 511 ntBASIC32.85■■■□□ 2.85
CDCA8Q53HL2 THA1P-201ENST00000590384 1145 ntBASIC32.85■■■□□ 2.85
CDCA8Q53HL2 AC011551.1-201ENST00000614101 683 ntBASIC32.85■■■□□ 2.85
CDCA8Q53HL2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDCA8Q53HL2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDCA8Q53HL2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDCA8Q53HL2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDCA8Q53HL2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC32.84■■■□□ 2.85
CDCA8Q53HL2 AC120024.1-201ENST00000562672 995 ntBASIC32.84■■■□□ 2.85
CDCA8Q53HL2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC32.84■■■□□ 2.85
CDCA8Q53HL2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CDCA8Q53HL2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC32.83■■■□□ 2.85
CDCA8Q53HL2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CDCA8Q53HL2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
CDCA8Q53HL2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC32.83■■■□□ 2.85
CDCA8Q53HL2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CDCA8Q53HL2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
CDCA8Q53HL2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms