Protein–RNA interactions for Protein: Q2WGJ8

TMEM249, Transmembrane protein 249, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249Q2WGJ8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TMEM249Q2WGJ8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM249Q2WGJ8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM249Q2WGJ8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TMEM249Q2WGJ8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TMEM249Q2WGJ8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.03■□□□□ 0.8
TMEM249Q2WGJ8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.02■□□□□ 0.8
TMEM249Q2WGJ8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM249Q2WGJ8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.02■□□□□ 0.8
TMEM249Q2WGJ8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM249Q2WGJ8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.02■□□□□ 0.8
TMEM249Q2WGJ8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM249Q2WGJ8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TMEM249Q2WGJ8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.02■□□□□ 0.8
TMEM249Q2WGJ8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM249Q2WGJ8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
TMEM249Q2WGJ8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.01■□□□□ 0.79
TMEM249Q2WGJ8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.01■□□□□ 0.79
TMEM249Q2WGJ8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM249Q2WGJ8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TMEM249Q2WGJ8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM249Q2WGJ8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM249Q2WGJ8 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM249Q2WGJ8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM249Q2WGJ8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
TMEM249Q2WGJ8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM249Q2WGJ8 KRT18P24-201ENST00000344739 1156 ntBASIC20■□□□□ 0.79
TMEM249Q2WGJ8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20■□□□□ 0.79
TMEM249Q2WGJ8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20■□□□□ 0.79
TMEM249Q2WGJ8 KRT16P3-201ENST00000439127 1283 ntBASIC20■□□□□ 0.79
TMEM249Q2WGJ8 UNC93B8-201ENST00000511903 705 ntBASIC20■□□□□ 0.79
TMEM249Q2WGJ8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM249Q2WGJ8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM249Q2WGJ8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM249Q2WGJ8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.99■□□□□ 0.79
TMEM249Q2WGJ8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
TMEM249Q2WGJ8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 MIR935-201ENST00000401179 91 ntBASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TMEM249Q2WGJ8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM249Q2WGJ8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TMEM249Q2WGJ8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM249Q2WGJ8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEM249Q2WGJ8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEM249Q2WGJ8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEM249Q2WGJ8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM249Q2WGJ8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEM249Q2WGJ8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.96■□□□□ 0.79
TMEM249Q2WGJ8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM249Q2WGJ8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM249Q2WGJ8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM249Q2WGJ8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEM249Q2WGJ8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM249Q2WGJ8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEM249Q2WGJ8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEM249Q2WGJ8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.94■□□□□ 0.78
TMEM249Q2WGJ8 AC137630.3-201ENST00000607245 391 ntBASIC19.94■□□□□ 0.78
TMEM249Q2WGJ8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 TSPY9P-201ENST00000440215 945 ntBASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 TSPY11P-201ENST00000442607 1045 ntBASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 AC091060.1-201ENST00000623524 1766 ntBASIC19.93■□□□□ 0.78
TMEM249Q2WGJ8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM249Q2WGJ8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEM249Q2WGJ8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
TMEM249Q2WGJ8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM249Q2WGJ8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.92■□□□□ 0.78
TMEM249Q2WGJ8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.92■□□□□ 0.78
TMEM249Q2WGJ8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.92■□□□□ 0.78
TMEM249Q2WGJ8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 AC120024.1-201ENST00000562672 995 ntBASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TMEM249Q2WGJ8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 AC021242.3-201ENST00000607598 1377 ntBASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TMEM249Q2WGJ8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TMEM249Q2WGJ8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms