Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LRP1Q07954 SNAI3-AS1-204ENST00000567997 2048 ntBASIC14.32□□□□□ -0.12
LRP1Q07954 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.31□□□□□ -0.12
LRP1Q07954 AF131216.4-201ENST00000638924 1588 ntBASIC14.31□□□□□ -0.12
LRP1Q07954 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRP1Q07954 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LRP1Q07954 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRP1Q07954 AC087623.3-201ENST00000607047 1098 ntBASIC14.31□□□□□ -0.12
LRP1Q07954 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRP1Q07954 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC14.31□□□□□ -0.12
LRP1Q07954 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRP1Q07954 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRP1Q07954 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRP1Q07954 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRP1Q07954 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC14.31□□□□□ -0.12
LRP1Q07954 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRP1Q07954 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LRP1Q07954 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRP1Q07954 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRP1Q07954 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRP1Q07954 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.3□□□□□ -0.12
LRP1Q07954 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.3□□□□□ -0.12
LRP1Q07954 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRP1Q07954 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRP1Q07954 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRP1Q07954 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.29□□□□□ -0.12
LRP1Q07954 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRP1Q07954 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LRP1Q07954 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.29□□□□□ -0.12
LRP1Q07954 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.29□□□□□ -0.12
LRP1Q07954 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRP1Q07954 AC024257.2-201ENST00000549699 147 ntBASIC14.29□□□□□ -0.12
LRP1Q07954 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRP1Q07954 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRP1Q07954 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.28□□□□□ -0.12
LRP1Q07954 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.28□□□□□ -0.12
LRP1Q07954 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC14.28□□□□□ -0.12
LRP1Q07954 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRP1Q07954 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
LRP1Q07954 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRP1Q07954 UNC93B3-201ENST00000308076 687 ntBASIC14.28□□□□□ -0.12
LRP1Q07954 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LRP1Q07954 MTDHP2-201ENST00000601468 714 ntBASIC14.28□□□□□ -0.12
LRP1Q07954 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LRP1Q07954 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRP1Q07954 PBX2P1-201ENST00000493219 1291 ntBASIC14.27□□□□□ -0.12
LRP1Q07954 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.27□□□□□ -0.12
LRP1Q07954 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.27□□□□□ -0.12
LRP1Q07954 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LRP1Q07954 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.27□□□□□ -0.12
LRP1Q07954 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LRP1Q07954 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LRP1Q07954 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRP1Q07954 AL355001.2-201ENST00000620617 1191 ntBASIC14.27□□□□□ -0.13
LRP1Q07954 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC14.27□□□□□ -0.13
LRP1Q07954 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC14.27□□□□□ -0.13
LRP1Q07954 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.27□□□□□ -0.13
LRP1Q07954 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRP1Q07954 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.27□□□□□ -0.13
LRP1Q07954 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LRP1Q07954 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRP1Q07954 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.26□□□□□ -0.13
LRP1Q07954 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.26□□□□□ -0.13
LRP1Q07954 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRP1Q07954 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRP1Q07954 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRP1Q07954 AC097381.1-201ENST00000429019 1296 ntBASIC14.26□□□□□ -0.13
LRP1Q07954 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRP1Q07954 AC090192.1-201ENST00000517740 490 ntBASIC14.25□□□□□ -0.13
LRP1Q07954 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.25□□□□□ -0.13
LRP1Q07954 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRP1Q07954 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
LRP1Q07954 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRP1Q07954 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
LRP1Q07954 AL356740.2-201ENST00000601559 647 ntBASIC14.24□□□□□ -0.13
LRP1Q07954 AC011551.1-201ENST00000614101 683 ntBASIC14.24□□□□□ -0.13
LRP1Q07954 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LRP1Q07954 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.24□□□□□ -0.13
LRP1Q07954 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.24□□□□□ -0.13
LRP1Q07954 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LRP1Q07954 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
LRP1Q07954 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LRP1Q07954 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.24□□□□□ -0.13
LRP1Q07954 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC14.24□□□□□ -0.13
LRP1Q07954 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRP1Q07954 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRP1Q07954 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRP1Q07954 MIR939-201ENST00000401314 82 ntBASIC14.23□□□□□ -0.13
LRP1Q07954 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRP1Q07954 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LRP1Q07954 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC14.23□□□□□ -0.13
LRP1Q07954 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.23□□□□□ -0.13
LRP1Q07954 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRP1Q07954 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC14.23□□□□□ -0.13
LRP1Q07954 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.23□□□□□ -0.13
LRP1Q07954 AC105265.2-201ENST00000467189 838 ntBASIC14.23□□□□□ -0.13
LRP1Q07954 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LRP1Q07954 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC14.23□□□□□ -0.13
LRP1Q07954 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LRP1Q07954 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms