Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPS27AP62979 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPS27AP62979 ZNRF2P2-203ENST00000454624 420 ntBASIC20.34■□□□□ 0.85
RPS27AP62979 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.34■□□□□ 0.85
RPS27AP62979 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.34■□□□□ 0.85
RPS27AP62979 AC126177.7-201ENST00000547904 679 ntBASIC20.34■□□□□ 0.85
RPS27AP62979 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RPS27AP62979 AP003733.4-201ENST00000623785 1697 ntBASIC20.34■□□□□ 0.85
RPS27AP62979 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPS27AP62979 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RPS27AP62979 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPS27AP62979 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPS27AP62979 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPS27AP62979 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.33■□□□□ 0.85
RPS27AP62979 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPS27AP62979 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RPS27AP62979 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.33■□□□□ 0.84
RPS27AP62979 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
RPS27AP62979 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS27AP62979 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPS27AP62979 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS27AP62979 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.32■□□□□ 0.84
RPS27AP62979 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.32■□□□□ 0.84
RPS27AP62979 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RPS27AP62979 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS27AP62979 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS27AP62979 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RPS27AP62979 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS27AP62979 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.31■□□□□ 0.84
RPS27AP62979 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RPS27AP62979 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RPS27AP62979 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RPS27AP62979 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.31■□□□□ 0.84
RPS27AP62979 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS27AP62979 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
RPS27AP62979 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS27AP62979 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS27AP62979 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS27AP62979 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS27AP62979 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS27AP62979 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS27AP62979 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS27AP62979 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RPS27AP62979 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.3■□□□□ 0.84
RPS27AP62979 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS27AP62979 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS27AP62979 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RPS27AP62979 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS27AP62979 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS27AP62979 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS27AP62979 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.29■□□□□ 0.84
RPS27AP62979 SLC6A10P-202ENST00000431994 2058 ntBASIC20.29■□□□□ 0.84
RPS27AP62979 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS27AP62979 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS27AP62979 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.29■□□□□ 0.84
RPS27AP62979 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS27AP62979 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.28■□□□□ 0.84
RPS27AP62979 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
RPS27AP62979 CR559946.2-201ENST00000623684 991 ntBASIC20.28■□□□□ 0.84
RPS27AP62979 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS27AP62979 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS27AP62979 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RPS27AP62979 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPS27AP62979 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPS27AP62979 AC068473.5-201ENST00000616428 2072 ntBASIC20.27■□□□□ 0.84
RPS27AP62979 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RPS27AP62979 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
RPS27AP62979 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS27AP62979 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RPS27AP62979 LINC01124-201ENST00000409786 2117 ntBASIC20.27■□□□□ 0.84
RPS27AP62979 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPS27AP62979 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RPS27AP62979 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RPS27AP62979 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPS27AP62979 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.26■□□□□ 0.83
RPS27AP62979 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
RPS27AP62979 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RPS27AP62979 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS27AP62979 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPS27AP62979 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS27AP62979 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RPS27AP62979 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS27AP62979 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS27AP62979 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS27AP62979 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS27AP62979 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS27AP62979 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS27AP62979 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS27AP62979 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPS27AP62979 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS27AP62979 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS27AP62979 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.23■□□□□ 0.83
RPS27AP62979 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPS27AP62979 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPS27AP62979 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS27AP62979 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RPS27AP62979 CLDN5-201ENST00000403084 2357 ntBASIC20.23■□□□□ 0.83
RPS27AP62979 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RPS27AP62979 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RPS27AP62979 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms