Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SEC61GP60059 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SEC61GP60059 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SEC61GP60059 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.33□□□□□ -0.27
SEC61GP60059 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61GP60059 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61GP60059 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SEC61GP60059 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SEC61GP60059 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61GP60059 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61GP60059 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SEC61GP60059 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC13.33□□□□□ -0.28
SEC61GP60059 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61GP60059 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SEC61GP60059 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61GP60059 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SEC61GP60059 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
SEC61GP60059 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SEC61GP60059 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61GP60059 AIRN-201ENST00000601203 4374 ntBASIC13.32□□□□□ -0.28
SEC61GP60059 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61GP60059 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61GP60059 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SEC61GP60059 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC61GP60059 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SEC61GP60059 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61GP60059 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61GP60059 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC13.31□□□□□ -0.28
SEC61GP60059 AC120057.4-201ENST00000624722 1615 ntBASIC13.31□□□□□ -0.28
SEC61GP60059 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SEC61GP60059 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61GP60059 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SEC61GP60059 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61GP60059 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61GP60059 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61GP60059 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SEC61GP60059 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC13.3□□□□□ -0.28
SEC61GP60059 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SEC61GP60059 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61GP60059 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SEC61GP60059 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61GP60059 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61GP60059 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SEC61GP60059 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SEC61GP60059 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61GP60059 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC13.28□□□□□ -0.28
SEC61GP60059 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61GP60059 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC13.28□□□□□ -0.28
SEC61GP60059 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61GP60059 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61GP60059 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SEC61GP60059 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61GP60059 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61GP60059 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SEC61GP60059 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61GP60059 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SEC61GP60059 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC13.27□□□□□ -0.28
SEC61GP60059 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SEC61GP60059 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SEC61GP60059 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61GP60059 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61GP60059 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SEC61GP60059 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.27□□□□□ -0.29
SEC61GP60059 AL121749.1-202ENST00000609313 2153 ntBASIC13.27□□□□□ -0.29
SEC61GP60059 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61GP60059 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SEC61GP60059 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
SEC61GP60059 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61GP60059 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61GP60059 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61GP60059 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SEC61GP60059 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms