Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC25A1P53007 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC25A1P53007 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC25A1P53007 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC25A1P53007 LINC01124-201ENST00000409786 2117 ntBASIC21.12■□□□□ 0.97
SLC25A1P53007 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC25A1P53007 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC25A1P53007 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SLC25A1P53007 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SLC25A1P53007 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC25A1P53007 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC25A1P53007 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLC25A1P53007 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC25A1P53007 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC25A1P53007 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC25A1P53007 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC25A1P53007 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC25A1P53007 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
SLC25A1P53007 RP9P-202ENST00000450133 1212 ntBASIC21.1■□□□□ 0.97
SLC25A1P53007 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC25A1P53007 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC25A1P53007 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC25A1P53007 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC25A1P53007 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC25A1P53007 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC25A1P53007 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC25A1P53007 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC25A1P53007 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SLC25A1P53007 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC25A1P53007 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SLC25A1P53007 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC25A1P53007 AC141586.4-201ENST00000624558 1573 ntBASIC21.08■□□□□ 0.97
SLC25A1P53007 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC25A1P53007 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC25A1P53007 LINC00543-201ENST00000567234 1845 ntBASIC21.08■□□□□ 0.96
SLC25A1P53007 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC25A1P53007 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC25A1P53007 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.07■□□□□ 0.96
SLC25A1P53007 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC25A1P53007 AC022413.1-201ENST00000624602 984 ntBASIC21.07■□□□□ 0.96
SLC25A1P53007 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC25A1P53007 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
SLC25A1P53007 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.07■□□□□ 0.96
SLC25A1P53007 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC25A1P53007 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC25A1P53007 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC25A1P53007 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC25A1P53007 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC25A1P53007 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SLC25A1P53007 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.06■□□□□ 0.96
SLC25A1P53007 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC25A1P53007 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC25A1P53007 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC25A1P53007 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC25A1P53007 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.06■□□□□ 0.96
SLC25A1P53007 MIR6089-201ENST00000616698 64 ntBASIC21.06■□□□□ 0.96
SLC25A1P53007 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC25A1P53007 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SLC25A1P53007 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC25A1P53007 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC25A1P53007 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC25A1P53007 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC25A1P53007 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC25A1P53007 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC25A1P53007 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC25A1P53007 AC093536.1-201ENST00000569153 554 ntBASIC21.05■□□□□ 0.96
SLC25A1P53007 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC25A1P53007 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC25A1P53007 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC25A1P53007 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC25A1P53007 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC25A1P53007 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC25A1P53007 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC25A1P53007 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC25A1P53007 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC25A1P53007 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.03■□□□□ 0.96
SLC25A1P53007 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC25A1P53007 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC25A1P53007 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC25A1P53007 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC25A1P53007 AC007029.1-201ENST00000604183 313 ntBASIC21.02■□□□□ 0.96
SLC25A1P53007 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC25A1P53007 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC25A1P53007 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC25A1P53007 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC25A1P53007 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC25A1P53007 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC25A1P53007 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC25A1P53007 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC25A1P53007 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SLC25A1P53007 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
SLC25A1P53007 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC25A1P53007 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21■□□□□ 0.95
SLC25A1P53007 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21■□□□□ 0.95
SLC25A1P53007 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC25A1P53007 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC25A1P53007 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC25A1P53007 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC25A1P53007 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21■□□□□ 0.95
SLC25A1P53007 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms