Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLCN1P35523 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.84■■□□□ 1.89
CLCN1P35523 AC096887.2-201ENST00000623443 1957 ntBASIC26.84■■□□□ 1.89
CLCN1P35523 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CLCN1P35523 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.84■■□□□ 1.89
CLCN1P35523 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CLCN1P35523 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CLCN1P35523 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CLCN1P35523 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
CLCN1P35523 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L13-201ENST00000554103 1267 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L15-201ENST00000611059 1267 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L11-201ENST00000611504 1267 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L12-201ENST00000614593 1267 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L23-201ENST00000615195 1269 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L24-201ENST00000617576 1269 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L22-201ENST00000618238 1269 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L20-201ENST00000619712 1269 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L14-201ENST00000621227 1267 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L21-201ENST00000622058 1269 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L10-201ENST00000622460 1267 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 DUX4L25-201ENST00000624915 1269 ntBASIC26.83■■□□□ 1.89
CLCN1P35523 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLCN1P35523 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CLCN1P35523 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.82■■□□□ 1.88
CLCN1P35523 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLCN1P35523 ABHD17AP4-201ENST00000411545 909 ntBASIC26.82■■□□□ 1.88
CLCN1P35523 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
CLCN1P35523 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.82■■□□□ 1.88
CLCN1P35523 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLCN1P35523 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CLCN1P35523 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CLCN1P35523 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.81■■□□□ 1.88
CLCN1P35523 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CLCN1P35523 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.81■■□□□ 1.88
CLCN1P35523 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.81■■□□□ 1.88
CLCN1P35523 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLCN1P35523 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.8■■□□□ 1.88
CLCN1P35523 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLCN1P35523 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLCN1P35523 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLCN1P35523 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLCN1P35523 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
CLCN1P35523 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLCN1P35523 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CLCN1P35523 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CLCN1P35523 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CLCN1P35523 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.8■■□□□ 1.88
CLCN1P35523 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.79■■□□□ 1.88
CLCN1P35523 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.79■■□□□ 1.88
CLCN1P35523 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
CLCN1P35523 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC26.79■■□□□ 1.88
CLCN1P35523 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLCN1P35523 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.79■■□□□ 1.88
CLCN1P35523 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CLCN1P35523 C9orf163-202ENST00000624034 2573 ntBASIC26.79■■□□□ 1.88
CLCN1P35523 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
CLCN1P35523 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.78■■□□□ 1.88
CLCN1P35523 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.78■■□□□ 1.88
CLCN1P35523 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN1P35523 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.78■■□□□ 1.88
CLCN1P35523 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN1P35523 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.78■■□□□ 1.88
CLCN1P35523 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN1P35523 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.78■■□□□ 1.88
CLCN1P35523 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN1P35523 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN1P35523 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.78■■□□□ 1.88
CLCN1P35523 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
CLCN1P35523 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC26.77■■□□□ 1.88
CLCN1P35523 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.77■■□□□ 1.88
CLCN1P35523 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.77■■□□□ 1.88
CLCN1P35523 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CLCN1P35523 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CLCN1P35523 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CLCN1P35523 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CLCN1P35523 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
CLCN1P35523 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.76■■□□□ 1.87
CLCN1P35523 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
CLCN1P35523 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.76■■□□□ 1.87
CLCN1P35523 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
CLCN1P35523 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CLCN1P35523 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC26.76■■□□□ 1.87
CLCN1P35523 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
CLCN1P35523 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CLCN1P35523 SLC25A24-204ENST00000569674 2357 ntBASIC26.75■■□□□ 1.87
CLCN1P35523 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CLCN1P35523 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.75■■□□□ 1.87
CLCN1P35523 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CLCN1P35523 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CLCN1P35523 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CLCN1P35523 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CLCN1P35523 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
CLCN1P35523 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CLCN1P35523 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
CLCN1P35523 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCN1P35523 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCN1P35523 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCN1P35523 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CLCN1P35523 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms