Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHAP31040 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHAP31040 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHAP31040 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.24■□□□□ 0.99
SDHAP31040 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SDHAP31040 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SDHAP31040 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SDHAP31040 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.24■□□□□ 0.99
SDHAP31040 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.23■□□□□ 0.99
SDHAP31040 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
SDHAP31040 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.23■□□□□ 0.99
SDHAP31040 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SDHAP31040 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SDHAP31040 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SDHAP31040 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SDHAP31040 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SDHAP31040 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAP31040 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAP31040 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAP31040 GPX1-201ENST00000419349 1106 ntBASIC21.22■□□□□ 0.99
SDHAP31040 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.22■□□□□ 0.99
SDHAP31040 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SDHAP31040 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.22■□□□□ 0.99
SDHAP31040 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAP31040 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAP31040 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SDHAP31040 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.22■□□□□ 0.99
SDHAP31040 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAP31040 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAP31040 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SDHAP31040 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAP31040 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAP31040 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAP31040 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SDHAP31040 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.21■□□□□ 0.99
SDHAP31040 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
SDHAP31040 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SDHAP31040 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.2■□□□□ 0.98
SDHAP31040 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHAP31040 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SDHAP31040 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SDHAP31040 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SDHAP31040 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.2■□□□□ 0.98
SDHAP31040 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SDHAP31040 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.2■□□□□ 0.98
SDHAP31040 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SDHAP31040 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.2■□□□□ 0.98
SDHAP31040 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
SDHAP31040 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.2■□□□□ 0.98
SDHAP31040 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDHAP31040 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDHAP31040 RAP2CP1-202ENST00000605179 643 ntBASIC21.19■□□□□ 0.98
SDHAP31040 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SDHAP31040 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SDHAP31040 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.18■□□□□ 0.98
SDHAP31040 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.18■□□□□ 0.98
SDHAP31040 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.18■□□□□ 0.98
SDHAP31040 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAP31040 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAP31040 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SDHAP31040 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.17■□□□□ 0.98
SDHAP31040 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAP31040 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAP31040 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAP31040 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SDHAP31040 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.17■□□□□ 0.98
SDHAP31040 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHAP31040 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHAP31040 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHAP31040 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHAP31040 LINC01124-201ENST00000409786 2117 ntBASIC21.16■□□□□ 0.98
SDHAP31040 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SDHAP31040 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SDHAP31040 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.15■□□□□ 0.98
SDHAP31040 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAP31040 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAP31040 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAP31040 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAP31040 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SDHAP31040 AC026202.3-201ENST00000600805 1127 ntBASIC21.15■□□□□ 0.98
SDHAP31040 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAP31040 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SDHAP31040 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
SDHAP31040 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SDHAP31040 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.14■□□□□ 0.98
SDHAP31040 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
SDHAP31040 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHAP31040 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHAP31040 KRT18P10-201ENST00000388836 1287 ntBASIC21.14■□□□□ 0.97
SDHAP31040 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.14■□□□□ 0.97
SDHAP31040 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHAP31040 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHAP31040 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.14■□□□□ 0.97
SDHAP31040 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SDHAP31040 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SDHAP31040 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAP31040 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAP31040 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAP31040 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SDHAP31040 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms